| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116493778
Identifier: 116493778
GI number: 116493778
Start: 203428
End: 204048
Strand: Direct
Name: 116493778
Synonym: LSEI_0207
Alternate gene names: NA
Gene position: 203428-204048 (Clockwise)
Preceding gene: 116493777
Following gene: 116493781
Centisome position: 7.03
GC content: 49.6
Gene sequence:
>621_bases ATGACTATCGGTATTATTGGATCAGGTAATGTCGGCCGGGCATTAGGCCAACTGTTTAGTCATGTTGGCGAGCAGGTGAT TATTTCACATCGGCATGGCGTGGCATCATTGGCACCGGTCATTGCAGAGATGCGCTCGACGGTCGAAGCTGGGACCGTTG CTGACGCGGCTAAACAAGACATTGTCGTGCTGGCCGTGCCATTTAATGCGTTGCCGGAATTGCCGACAAGCGTGGATCCG AAGACGATTATTATTGACGCGACTAACTATTATCCTAGCCGCGATGGCGACCAGCCAGCACTGGCAGCACATCAAGTCAC TTCATCAGAACTCGTTGCTAAACATTTTGGTACGAAAAAAGTGGTCAAGGCATTCAATACAATTGCGATGACCAAAATTC GTAGTCTTGCCAAGCCAAGTCAGCCAGCAGGAAGAATTGCCATTCCGATTGCCGGGGATGATAATGCCGCTAAGCAGACG GTCACGACATTGATCAAACGAATTGGGTTTGATGTTGTCGATCTCGGCAGTCTATCAGATAGCTATCCAGCACAGGCGGA TGGACCGTTGTTCTTATTTGCTGGCGATGCTGATCAGGTTCGTGCTCAAGTGCAACACTAA
Upstream 100 bases:
>100_bases GGTGTGCGGCTTTTTGAGTGGGCTAGAATGCTTGCTGGCCGGTATTTAAAGAAGCAAGGCGGTATAATGAAGGTGTGATC TCAATAGAGAGGGTGATTAG
Downstream 100 bases:
>100_bases GGGGTTAACTGGGCGCCAAAGCTATATGAAATTCGTATAAAAAGAGCATTGCCCGTCTACTGCGGCAATGCTCTTTTAAT TATGCAGGCTGACCCATCCG
Product: dinucleotide-binding protein
Products: NA
Alternate protein names: Oxidoreductase; NADp Oxidoreductase Co; Truncated NADP Oxidoreductase Co; NADP Oxidoreductase; 3-Hydroxyisobutyrate Dehydrogenase Protein; 2-Dehydropantoate 2-Reductase; NADPH-Dependent; Myo-Inositol 2-Dehydrogenase Protein
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTIGIIGSGNVGRALGQLFSHVGEQVIISHRHGVASLAPVIAEMRSTVEAGTVADAAKQDIVVLAVPFNALPELPTSVDP KTIIIDATNYYPSRDGDQPALAAHQVTSSELVAKHFGTKKVVKAFNTIAMTKIRSLAKPSQPAGRIAIPIAGDDNAAKQT VTTLIKRIGFDVVDLGSLSDSYPAQADGPLFLFAGDADQVRAQVQH
Sequences:
>Translated_206_residues MTIGIIGSGNVGRALGQLFSHVGEQVIISHRHGVASLAPVIAEMRSTVEAGTVADAAKQDIVVLAVPFNALPELPTSVDP KTIIIDATNYYPSRDGDQPALAAHQVTSSELVAKHFGTKKVVKAFNTIAMTKIRSLAKPSQPAGRIAIPIAGDDNAAKQT VTTLIKRIGFDVVDLGSLSDSYPAQADGPLFLFAGDADQVRAQVQH >Mature_205_residues TIGIIGSGNVGRALGQLFSHVGEQVIISHRHGVASLAPVIAEMRSTVEAGTVADAAKQDIVVLAVPFNALPELPTSVDPK TIIIDATNYYPSRDGDQPALAAHQVTSSELVAKHFGTKKVVKAFNTIAMTKIRSLAKPSQPAGRIAIPIAGDDNAAKQTV TTLIKRIGFDVVDLGSLSDSYPAQADGPLFLFAGDADQVRAQVQH
Specific function: Unknown
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21615; Mature: 21484
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIGIIGSGNVGRALGQLFSHVGEQVIISHRHGVASLAPVIAEMRSTVEAGTVADAAKQD CEEEEECCCCHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCC IVVLAVPFNALPELPTSVDPKTIIIDATNYYPSRDGDQPALAAHQVTSSELVAKHFGTKK EEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH VVKAFNTIAMTKIRSLAKPSQPAGRIAIPIAGDDNAAKQTVTTLIKRIGFDVVDLGSLSD HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEECCCCCC SYPAQADGPLFLFAGDADQVRAQVQH CCCCCCCCCEEEEECCHHHHHHHCCC >Mature Secondary Structure TIGIIGSGNVGRALGQLFSHVGEQVIISHRHGVASLAPVIAEMRSTVEAGTVADAAKQD EEEEECCCCHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCC IVVLAVPFNALPELPTSVDPKTIIIDATNYYPSRDGDQPALAAHQVTSSELVAKHFGTKK EEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH VVKAFNTIAMTKIRSLAKPSQPAGRIAIPIAGDDNAAKQTVTTLIKRIGFDVVDLGSLSD HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEECCCCCC SYPAQADGPLFLFAGDADQVRAQVQH CCCCCCCCCEEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA