| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493467
Identifier: 116493467
GI number: 116493467
Start: 1714640
End: 1715368
Strand: Direct
Name: 116493467
Synonym: PEPE_1739
Alternate gene names: NA
Gene position: 1714640-1715368 (Clockwise)
Preceding gene: 116493466
Following gene: 116493469
Centisome position: 93.57
GC content: 42.25
Gene sequence:
>729_bases TTGAAAACTGCTGACGTCAAAAGACGTTTCTTTTGGCTTGTCATATCTATTATTTTAAATTCGGCGGCCAACGCTTTATC CATTGCTACGGGTTTAGGTAGCGCCGTCTGGACGGGTTCTGCAGTGAATCTCTCACATTGGGTAGCTCATACCACCAGCC CTGCAATTGCTAATCACGTGATGGGAACGGTTTTAGTTTTATACGGAGTTTCAGTAGCTTTTTTGACCATGCTTTTATCG CGCCATTTGGATTGGGCTCGTTTTGCCCGCAACATTTTATTTGTTGTACCGTTTAGTTATCTCGTCCAATGGTTCACCCC TTTTTGGAGTGATACTTTAAAAATCAGCCAGTTGCAAGCTAATTTTCAACATCCTTGGCAGCTTTTAACTTCTGTTATTC TGGATATTATTGGTTTATTGGGCGTGGCTGTAGCTGTTTCACTCTATCAACGGGCGAATTTGATTATGCATCCCAACGAT GATCTTTCCTACATTCTACGTTTTAGATATCTTCACGGTTTAGCCTCAGTTTCACAATGGGCTAGTTATGTCCCACCACT TATCATCACCGCTCTTAGCTGCTTTGCTAACGGCGGCCGATTATGGTCATTTGGTTTCGGAACTGTTTGGGCCTTTATTA CCCAAGGTTACGTTCAAGGTTGGTCCGATCAACACGTAGTTCCAACCTTTAGACATCATTTTTCATTTCAAAGTCCAAAA AAGCTTTGA
Upstream 100 bases:
>100_bases GTTAGCTTTAGTATTTATTCAACCTATCGGACCTTGGCTTTACTTCTGGTTAGGACAAGCTAAAACGGATTAATCGGTCC TAGGAAGAAGATGAATTTTT
Downstream 100 bases:
>100_bases TAAAAGGGCGCATTCCATCGTGAATGCTAACAACCTTTTACCAAAGCTTTTTTATTTATTCAATGTTTTAATGATTTTTT TAGCAACAATTGTTGCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Amino Acid Transporter; Fructose Permease
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKTADVKRRFFWLVISIILNSAANALSIATGLGSAVWTGSAVNLSHWVAHTTSPAIANHVMGTVLVLYGVSVAFLTMLLS RHLDWARFARNILFVVPFSYLVQWFTPFWSDTLKISQLQANFQHPWQLLTSVILDIIGLLGVAVAVSLYQRANLIMHPND DLSYILRFRYLHGLASVSQWASYVPPLIITALSCFANGGRLWSFGFGTVWAFITQGYVQGWSDQHVVPTFRHHFSFQSPK KL
Sequences:
>Translated_242_residues MKTADVKRRFFWLVISIILNSAANALSIATGLGSAVWTGSAVNLSHWVAHTTSPAIANHVMGTVLVLYGVSVAFLTMLLS RHLDWARFARNILFVVPFSYLVQWFTPFWSDTLKISQLQANFQHPWQLLTSVILDIIGLLGVAVAVSLYQRANLIMHPND DLSYILRFRYLHGLASVSQWASYVPPLIITALSCFANGGRLWSFGFGTVWAFITQGYVQGWSDQHVVPTFRHHFSFQSPK KL >Mature_242_residues MKTADVKRRFFWLVISIILNSAANALSIATGLGSAVWTGSAVNLSHWVAHTTSPAIANHVMGTVLVLYGVSVAFLTMLLS RHLDWARFARNILFVVPFSYLVQWFTPFWSDTLKISQLQANFQHPWQLLTSVILDIIGLLGVAVAVSLYQRANLIMHPND DLSYILRFRYLHGLASVSQWASYVPPLIITALSCFANGGRLWSFGFGTVWAFITQGYVQGWSDQHVVPTFRHHFSFQSPK KL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27182; Mature: 27182
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTADVKRRFFWLVISIILNSAANALSIATGLGSAVWTGSAVNLSHWVAHTTSPAIANHV CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCCHHHHHHH MGTVLVLYGVSVAFLTMLLSRHLDWARFARNILFVVPFSYLVQWFTPFWSDTLKISQLQA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFQHPWQLLTSVILDIIGLLGVAVAVSLYQRANLIMHPNDDLSYILRFRYLHGLASVSQW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHH ASYVPPLIITALSCFANGGRLWSFGFGTVWAFITQGYVQGWSDQHVVPTFRHHFSFQSPK HHHCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC KL CC >Mature Secondary Structure MKTADVKRRFFWLVISIILNSAANALSIATGLGSAVWTGSAVNLSHWVAHTTSPAIANHV CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCCHHHHHHH MGTVLVLYGVSVAFLTMLLSRHLDWARFARNILFVVPFSYLVQWFTPFWSDTLKISQLQA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFQHPWQLLTSVILDIIGLLGVAVAVSLYQRANLIMHPNDDLSYILRFRYLHGLASVSQW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHH ASYVPPLIITALSCFANGGRLWSFGFGTVWAFITQGYVQGWSDQHVVPTFRHHFSFQSPK HHHCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC KL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA