| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493466
Identifier: 116493466
GI number: 116493466
Start: 1714403
End: 1714612
Strand: Direct
Name: 116493466
Synonym: PEPE_1738
Alternate gene names: NA
Gene position: 1714403-1714612 (Clockwise)
Preceding gene: 116493465
Following gene: 116493467
Centisome position: 93.56
GC content: 40.0
Gene sequence:
>210_bases ATGCACAAGCATCTACCTACTAAGCGTCAAAAACAACGTCTTGCTCCAGTGGTGGCTTTCGAAATTACCGGTCTTTTTAT TGCTTTAAAAGATATTATTACTGCCAAAAAATTCCGTCATGGGTCGCGTGGTCTGTGGTTAGCTTTAGTATTTATTCAAC CTATCGGACCTTGGCTTTACTTCTGGTTAGGACAAGCTAAAACGGATTAA
Upstream 100 bases:
>100_bases GCTATCGTCTACTATTTCAAACGAATTCGAGTAAAATCCTAACCTAGTAATCGCTTTCATGTTAGAATTAACCTAACTTA TTCAGCTAGGAGGAATCATT
Downstream 100 bases:
>100_bases TCGGTCCTAGGAAGAAGATGAATTTTTTTGAAAACTGCTGACGTCAAAAGACGTTTCTTTTGGCTTGTCATATCTATTAT TTTAAATTCGGCGGCCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MHKHLPTKRQKQRLAPVVAFEITGLFIALKDIITAKKFRHGSRGLWLALVFIQPIGPWLYFWLGQAKTD
Sequences:
>Translated_69_residues MHKHLPTKRQKQRLAPVVAFEITGLFIALKDIITAKKFRHGSRGLWLALVFIQPIGPWLYFWLGQAKTD >Mature_69_residues MHKHLPTKRQKQRLAPVVAFEITGLFIALKDIITAKKFRHGSRGLWLALVFIQPIGPWLYFWLGQAKTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7999; Mature: 7999
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKHLPTKRQKQRLAPVVAFEITGLFIALKDIITAKKFRHGSRGLWLALVFIQPIGPWLY CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH FWLGQAKTD HHHCCCCCC >Mature Secondary Structure MHKHLPTKRQKQRLAPVVAFEITGLFIALKDIITAKKFRHGSRGLWLALVFIQPIGPWLY CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH FWLGQAKTD HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA