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The map label for this gene is fas6 [H]

Identifier: 116493469

GI number: 116493469

Start: 1717673

End: 1718236

Strand: Direct

Name: fas6 [H]

Synonym: PEPE_1741

Alternate gene names: 116493469

Gene position: 1717673-1718236 (Clockwise)

Preceding gene: 116493467

Following gene: 116493471

Centisome position: 93.74

GC content: 40.07

Gene sequence:

>564_bases
TTGAGAAAAATTGCAGTATATTGTGGGGCAGCCGCCGGCAACAATCCAACCTACGCTAACAGCGCCCGTAAGTTAGGTAA
ATGGATGGCTAGTAATAATATTGGCTTAGTTTACGGAGGTGGGCAATTTGGTTTGATGGGAATCATCGCCAAAACTGTCA
TTGAAAATGGTGGTCATGTCGATGGTATTATTCCTGAAAATTTAGCAGCACGGGGCGCAAGCTATCAAGCTATCTCAAAT
CTCCAAGTAGTCAAAGATATGTCAATTCGTAAGCAATTAATGATGGATATGGCAGATGGTTTCATTGCCTTACCTGGAGG
TCCCGGCACGTTGGAGGAAATTTCTGAAGTATTTTCTTGGTCTTTAATTGGTGACAATAATAAGCCATGTGTCCTTTTCA
ATACTAATCACTACTATGATAATCTTCAAAACATGTATGATCATATGGTGGTCGAAGGTTTTCTTACCAGTCAAGCTCGG
CAAAAGCTCCTTTTCAGTGATTCCGTTGAACAAATTGCAGAATTTATGGACACCTATGTTCCACCAAAAATTCGTGAATA
TTAA

Upstream 100 bases:

>100_bases
AGTTACTAAATGAATTTAAATTAACGATTACCTAATTCACTTTTCGCGCTTAAATTTTGATGATAAGATTAATTTAACTT
TGTCTTAAGGAGTGATTATT

Downstream 100 bases:

>100_bases
CCCGATGATGCGCATCTAGCGCATTTTTTTGTACAAAATTCCTATTTCAGCATCATTACAATTAAACCAATGGTAATAAT
TATTCGAATTATAAAATGAT

Product: Rossmann fold nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRKIAVYCGAAAGNNPTYANSARKLGKWMASNNIGLVYGGGQFGLMGIIAKTVIENGGHVDGIIPENLAARGASYQAISN
LQVVKDMSIRKQLMMDMADGFIALPGGPGTLEEISEVFSWSLIGDNNKPCVLFNTNHYYDNLQNMYDHMVVEGFLTSQAR
QKLLFSDSVEQIAEFMDTYVPPKIREY

Sequences:

>Translated_187_residues
MRKIAVYCGAAAGNNPTYANSARKLGKWMASNNIGLVYGGGQFGLMGIIAKTVIENGGHVDGIIPENLAARGASYQAISN
LQVVKDMSIRKQLMMDMADGFIALPGGPGTLEEISEVFSWSLIGDNNKPCVLFNTNHYYDNLQNMYDHMVVEGFLTSQAR
QKLLFSDSVEQIAEFMDTYVPPKIREY
>Mature_187_residues
MRKIAVYCGAAAGNNPTYANSARKLGKWMASNNIGLVYGGGQFGLMGIIAKTVIENGGHVDGIIPENLAARGASYQAISN
LQVVKDMSIRKQLMMDMADGFIALPGGPGTLEEISEVFSWSLIGDNNKPCVLFNTNHYYDNLQNMYDHMVVEGFLTSQAR
QKLLFSDSVEQIAEFMDTYVPPKIREY

Specific function: The FAS-operon encodes genes involved in cytokinin production and in host plant fasciation (leafy gall) [H]

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=210, Percent_Identity=32.3809523809524, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20554; Mature: 20554

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIAVYCGAAAGNNPTYANSARKLGKWMASNNIGLVYGGGQFGLMGIIAKTVIENGGHV
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCC
DGIIPENLAARGASYQAISNLQVVKDMSIRKQLMMDMADGFIALPGGPGTLEEISEVFSW
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHEE
SLIGDNNKPCVLFNTNHYYDNLQNMYDHMVVEGFLTSQARQKLLFSDSVEQIAEFMDTYV
EEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPKIREY
CCCCCCC
>Mature Secondary Structure
MRKIAVYCGAAAGNNPTYANSARKLGKWMASNNIGLVYGGGQFGLMGIIAKTVIENGGHV
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCC
DGIIPENLAARGASYQAISNLQVVKDMSIRKQLMMDMADGFIALPGGPGTLEEISEVFSW
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHEE
SLIGDNNKPCVLFNTNHYYDNLQNMYDHMVVEGFLTSQARQKLLFSDSVEQIAEFMDTYV
EEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPKIREY
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8169198 [H]