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The map label for this gene is apl [H]

Identifier: 116493465

GI number: 116493465

Start: 1713727

End: 1714344

Strand: Direct

Name: apl [H]

Synonym: PEPE_1737

Alternate gene names: 116493465

Gene position: 1713727-1714344 (Clockwise)

Preceding gene: 116493460

Following gene: 116493466

Centisome position: 93.52

GC content: 40.78

Gene sequence:

>618_bases
ATGGAACAATACATTATTAATTTCGTAAACGACTTTGGTTATTTAGGAATTATTTTGCTAATTACACTGGAGAACGTCTT
TCCCCCCATCCCTTCAGAAGTGATTTTGACTTTTGCCGGCTTCATTACCCTTTCTTCCAAACTTACCGTCTGGGGTAGTG
TCCTTGCAGCAACAATTGGAGCGGTGATTGGGGCAGTGATTCTATATATTATTGGAAGTTATCTAACCGTCGAACGCTTA
GGACGTCTAATCAGTAGCCGCCTTGGTAAAATCCTACGTTTAAAACATAGCGACGTTACCAAAACTCATAATTTCTTTGT
CAAACATGGTTCCAAAACGATTTTCTTTGGCCGTTTTGTTCCCGTCGTTCGGAGCCTAATTTCTTTACCAGCGGGTATGA
CTAGAATGCCTTGGAAAATCTTTGTTTTATTAACTACACTGGGAACGTTGATTTGGAATGTTGTACTCATTCTGCTTGGT
CGACTGGCAGGTGAGGCTTGGTCCGAAGTATCAGCTACAATCGACTCCTACTCAAGCTTAGTTTTAATCGTTCTGATCGT
GCTGTTTGCTGGATCAGCTATCGTCTACTATTTCAAACGAATTCGAGTAAAATCCTAA

Upstream 100 bases:

>100_bases
CTTAAGTTCACTTAACTCCAATGGATTTTCATAGACTTTAAGCTCCAACATCTGAATAATAATAGGAAAATAGTGACAAA
ATATTCTTTGGAGGACCCCA

Downstream 100 bases:

>100_bases
CCTAGTAATCGCTTTCATGTTAGAATTAACCTAACTTATTCAGCTAGGAGGAATCATTATGCACAAGCATCTACCTACTA
AGCGTCAAAAACAACGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MEQYIINFVNDFGYLGIILLITLENVFPPIPSEVILTFAGFITLSSKLTVWGSVLAATIGAVIGAVILYIIGSYLTVERL
GRLISSRLGKILRLKHSDVTKTHNFFVKHGSKTIFFGRFVPVVRSLISLPAGMTRMPWKIFVLLTTLGTLIWNVVLILLG
RLAGEAWSEVSATIDSYSSLVLIVLIVLFAGSAIVYYFKRIRVKS

Sequences:

>Translated_205_residues
MEQYIINFVNDFGYLGIILLITLENVFPPIPSEVILTFAGFITLSSKLTVWGSVLAATIGAVIGAVILYIIGSYLTVERL
GRLISSRLGKILRLKHSDVTKTHNFFVKHGSKTIFFGRFVPVVRSLISLPAGMTRMPWKIFVLLTTLGTLIWNVVLILLG
RLAGEAWSEVSATIDSYSSLVLIVLIVLFAGSAIVYYFKRIRVKS
>Mature_205_residues
MEQYIINFVNDFGYLGIILLITLENVFPPIPSEVILTFAGFITLSSKLTVWGSVLAATIGAVIGAVILYIIGSYLTVERL
GRLISSRLGKILRLKHSDVTKTHNFFVKHGSKTIFFGRFVPVVRSLISLPAGMTRMPWKIFVLLTTLGTLIWNVVLILLG
RLAGEAWSEVSATIDSYSSLVLIVLIVLFAGSAIVYYFKRIRVKS

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=162, Percent_Identity=31.4814814814815, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22710; Mature: 22710

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQYIINFVNDFGYLGIILLITLENVFPPIPSEVILTFAGFITLSSKLTVWGSVLAATIG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVIGAVILYIIGSYLTVERLGRLISSRLGKILRLKHSDVTKTHNFFVKHGSKTIFFGRFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEHHHHH
PVVRSLISLPAGMTRMPWKIFVLLTTLGTLIWNVVLILLGRLAGEAWSEVSATIDSYSSL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIVLIVLFAGSAIVYYFKRIRVKS
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQYIINFVNDFGYLGIILLITLENVFPPIPSEVILTFAGFITLSSKLTVWGSVLAATIG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVIGAVILYIIGSYLTVERLGRLISSRLGKILRLKHSDVTKTHNFFVKHGSKTIFFGRFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEHHHHH
PVVRSLISLPAGMTRMPWKIFVLLTTLGTLIWNVVLILLGRLAGEAWSEVSATIDSYSSL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIVLIVLFAGSAIVYYFKRIRVKS
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]