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The map label for this gene is fnr [H]

Identifier: 116493423

GI number: 116493423

Start: 1670612

End: 1671265

Strand: Direct

Name: fnr [H]

Synonym: PEPE_1695

Alternate gene names: 116493423

Gene position: 1670612-1671265 (Clockwise)

Preceding gene: 116493416

Following gene: 116493424

Centisome position: 91.17

GC content: 32.72

Gene sequence:

>654_bases
ATGAACACTAGCTATTTAATTGACTTTTTAGAGAATAAACAGGTTTCTACAATTACCAAAACAAAACATTCCTATCTGAC
CTATCATGGTTTAGAAGAAGGTTATACATATGTCTTGAAAAAGGGAATTGTCAAAACCAGCATCATTTTAAAGAATGGTC
GTGAATTTAATCTTTCTTACATAAATTCGACTGATATTGTTTCGCTTTTGAGAGATGAAATTTCTGCCTATACGGCTTCG
CCTTTGAACGTGCGTATTGAATCTGACGAAGCTATTTTTTATCGCATCCCGCGTAAAACATTTTGGGATTATGTTAATCA
CGATACTCATTTACAAGATTACGTGCGTGACTACTATCGAATTAAATTAACCCAAAATATAAAATCGTTACAATGGATGA
CTATGAACGGTAAGAAAGGTGCCGTCTGCGCCTTTATCTATAAGTTAATTGATATTTTTGGTAGGCGTGGAGCGACTGGT
ATCTTGATTGATTTTCCCATTACTAACGAAGAAATCGCCAATTTCTGTGGGATTTCAACTAGAAACAGCGTTAATCGAAT
TATTCATGATTTAAAAGAACAACACGTAATTGATATCAAGAATCAGAAAATTTTTATTTATGATGAAAACTATTTACGTG
AATTTACGATTTAA

Upstream 100 bases:

>100_bases
ACATTTGGGTATAACATTTGTTACACTTCTCACAATTTTTTCTTATGATAATAGATGTCTGTACATATTATTTACTTTTA
GACATATGGAGAGTTAAAAA

Downstream 100 bases:

>100_bases
AAGTTAGGAGAAATATCGTTATGAAGAAGAAATTATTTTATGGAGCACTTCCGTATTACACAGCTAGCTTGGCTATCCAT
ATTTTGGGCATTATCTTACT

Product: cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNTSYLIDFLENKQVSTITKTKHSYLTYHGLEEGYTYVLKKGIVKTSIILKNGREFNLSYINSTDIVSLLRDEISAYTAS
PLNVRIESDEAIFYRIPRKTFWDYVNHDTHLQDYVRDYYRIKLTQNIKSLQWMTMNGKKGAVCAFIYKLIDIFGRRGATG
ILIDFPITNEEIANFCGISTRNSVNRIIHDLKEQHVIDIKNQKIFIYDENYLREFTI

Sequences:

>Translated_217_residues
MNTSYLIDFLENKQVSTITKTKHSYLTYHGLEEGYTYVLKKGIVKTSIILKNGREFNLSYINSTDIVSLLRDEISAYTAS
PLNVRIESDEAIFYRIPRKTFWDYVNHDTHLQDYVRDYYRIKLTQNIKSLQWMTMNGKKGAVCAFIYKLIDIFGRRGATG
ILIDFPITNEEIANFCGISTRNSVNRIIHDLKEQHVIDIKNQKIFIYDENYLREFTI
>Mature_217_residues
MNTSYLIDFLENKQVSTITKTKHSYLTYHGLEEGYTYVLKKGIVKTSIILKNGREFNLSYINSTDIVSLLRDEISAYTAS
PLNVRIESDEAIFYRIPRKTFWDYVNHDTHLQDYVRDYYRIKLTQNIKSLQWMTMNGKKGAVCAFIYKLIDIFGRRGATG
ILIDFPITNEEIANFCGISTRNSVNRIIHDLKEQHVIDIKNQKIFIYDENYLREFTI

Specific function: It is involved in the activation of genes necessary for anaerobic respiration [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 25478; Mature: 25478

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSYLIDFLENKQVSTITKTKHSYLTYHGLEEGYTYVLKKGIVKTSIILKNGREFNLSY
CCCCEEEEECCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHCCCEEEEEEECCCEEEEEE
INSTDIVSLLRDEISAYTASPLNVRIESDEAIFYRIPRKTFWDYVNHDTHLQDYVRDYYR
ECCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHE
IKLTQNIKSLQWMTMNGKKGAVCAFIYKLIDIFGRRGATGILIDFPITNEEIANFCGIST
EEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCC
RNSVNRIIHDLKEQHVIDIKNQKIFIYDENYLREFTI
CHHHHHHHHHHHHCCEEEECCCEEEEEECCHHHCCCC
>Mature Secondary Structure
MNTSYLIDFLENKQVSTITKTKHSYLTYHGLEEGYTYVLKKGIVKTSIILKNGREFNLSY
CCCCEEEEECCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHCCCEEEEEEECCCEEEEEE
INSTDIVSLLRDEISAYTASPLNVRIESDEAIFYRIPRKTFWDYVNHDTHLQDYVRDYYR
ECCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHE
IKLTQNIKSLQWMTMNGKKGAVCAFIYKLIDIFGRRGATGILIDFPITNEEIANFCGIST
EEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCC
RNSVNRIIHDLKEQHVIDIKNQKIFIYDENYLREFTI
CHHHHHHHHHHHHCCEEEECCCEEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8846791; 9384377 [H]