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The map label for this gene is rpmE2

Identifier: 116493296

GI number: 116493296

Start: 1537153

End: 1537398

Strand: Reverse

Name: rpmE2

Synonym: PEPE_1568

Alternate gene names: 116493296

Gene position: 1537398-1537153 (Counterclockwise)

Preceding gene: 116493297

Following gene: 116493294

Centisome position: 83.9

GC content: 39.43

Gene sequence:

>246_bases
ATGAAAAAAGGAATTCATCCAGACTATCATCCAGTTGTATTTCAAGATTCAGCAACTGGTTTTAAGTTCTTGTCAGGTTC
AACTGTAGGTTCAGCTGAAACAATCAAGTGGGAAGACGGTAACGAATACCCATTGATTCGTGTGGAAATCACATCTGACT
CACATCCTTTCTACACAGGACGTCAAAAGTTCCAACAAGCAGACGGTACTGTTGCAAAATTCAACAAAAAGTACGGTTTG
GCTTAA

Upstream 100 bases:

>100_bases
ACCTTGTTTAAGTTGTTTTTCTATGCTATTATTGGGGACGTTGATTTATAATAAATAACTATGACTCAGCAAATGACTCA
TGGCAAAGGAGCGTAATATC

Downstream 100 bases:

>100_bases
TTATAACCATTGGTTATCAAAAAGAGGCACCGCTGAATTTATCAGTGGTACCTCTTTTTTTGTGGTCTGAAATATAGTTT
AGGATTGCTTCTCAGTAATC

Product: 50S ribosomal protein L31P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MKKGIHPDYHPVVFQDSATGFKFLSGSTVGSAETIKWEDGNEYPLIRVEITSDSHPFYTGRQKFQQADGTVAKFNKKYGL
A

Sequences:

>Translated_81_residues
MKKGIHPDYHPVVFQDSATGFKFLSGSTVGSAETIKWEDGNEYPLIRVEITSDSHPFYTGRQKFQQADGTVAKFNKKYGL
A
>Mature_81_residues
MKKGIHPDYHPVVFQDSATGFKFLSGSTVGSAETIKWEDGNEYPLIRVEITSDSHPFYTGRQKFQQADGTVAKFNKKYGL
A

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=79, Percent_Identity=40.5063291139241, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_PEDPA (Q03DY3)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_805031.1
- ProteinModelPortal:   Q03DY3
- SMR:   Q03DY3
- STRING:   Q03DY3
- GeneID:   4417200
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_1568
- NMPDR:   fig|278197.10.peg.1377
- eggNOG:   COG0254
- HOGENOM:   HBG610087
- OMA:   QFLTRST
- PhylomeDB:   Q03DY3
- BioCyc:   PPEN278197:PEPE_1568-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9070; Mature: 9070

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGIHPDYHPVVFQDSATGFKFLSGSTVGSAETIKWEDGNEYPLIRVEITSDSHPFYTG
CCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCC
RQKFQQADGTVAKFNKKYGLA
HHHHHHCCCCEEEECCCCCCC
>Mature Secondary Structure
MKKGIHPDYHPVVFQDSATGFKFLSGSTVGSAETIKWEDGNEYPLIRVEITSDSHPFYTG
CCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCC
RQKFQQADGTVAKFNKKYGLA
HHHHHHCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA