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The map label for this gene is ywpE [H]

Identifier: 116493294

GI number: 116493294

Start: 1535030

End: 1535719

Strand: Reverse

Name: ywpE [H]

Synonym: PEPE_1566

Alternate gene names: 116493294

Gene position: 1535719-1535030 (Counterclockwise)

Preceding gene: 116493296

Following gene: 116493293

Centisome position: 83.81

GC content: 37.25

Gene sequence:

>690_bases
ATGAGTAAAAAACTAAAAAATTGGTTAGTTTCGATTGGATTAACATTATTGGTGCTACTAAGTTTAGCGATGATTTTTAA
TCGTCAAATCAAAACATGGATGGTAGCACAATATAATCCAGAGGTGAACGAGAAAGTGGTTGCTAAAAACACTGAAAAGA
AAGCCAATTTTGACTATACAAAAGTAAAATCATTGGATTGGCAGACGGTCCTAAAGGCACGGACTTCGGAGAAAAGAATT
AAAGTGATTGGTGAAATTGTTTACCCTGATATAAACATACACCTTCCGATCGGCAAAGGGGTCGATAATCTTACGTTGGC
GTTGGCGGCGGGAACTTTAAAAGAAAATCAGCGAATGGGTGAAGGTAACTACGCATTGGCTGGACATCATATGGTTGATA
AAAATGTTTTATTTAGTCCGCTTTATTGGAAAGCCAAAATTGGGCAAAAGGTTTATTTGACAGATGAGACCAATATTTAT
GAGTATCGGGTAGACACCCGTAAATTTATAAAGGCGACCGATGTGCAAGTAGTTGACGATATTAAAGGTAAGAAAATTTT
AACGTTGGTTACCTGTGATGATACGGGAGCGGGTCGTTTGATGATTCGGGCTAAATTTATCAAGAAAATGAGTCATACCA
AGGCTCCGGAAGCAGTTCAAAAAGAGTTTTCAGAAAAGTTTAATCGTTAA

Upstream 100 bases:

>100_bases
TCCTTTTCGATTGAAAAACATCATAAAAAGCCCTCTTTCAAAAAAGATATACCAATATACAATACCATAAAAATTAAAAA
TAGTAATGGAGCAAAAGTCA

Downstream 100 bases:

>100_bases
GAAAATTTAGTGTTCAAATTCATATAATTTGCTTGACGAATTTGTTACTATTAATATCATATATAGGAAGTTTTGAAAGG
ATGGGATTGAATGGTAGGAA

Product: sortase (surface protein transpeptidase)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSKKLKNWLVSIGLTLLVLLSLAMIFNRQIKTWMVAQYNPEVNEKVVAKNTEKKANFDYTKVKSLDWQTVLKARTSEKRI
KVIGEIVYPDINIHLPIGKGVDNLTLALAAGTLKENQRMGEGNYALAGHHMVDKNVLFSPLYWKAKIGQKVYLTDETNIY
EYRVDTRKFIKATDVQVVDDIKGKKILTLVTCDDTGAGRLMIRAKFIKKMSHTKAPEAVQKEFSEKFNR

Sequences:

>Translated_229_residues
MSKKLKNWLVSIGLTLLVLLSLAMIFNRQIKTWMVAQYNPEVNEKVVAKNTEKKANFDYTKVKSLDWQTVLKARTSEKRI
KVIGEIVYPDINIHLPIGKGVDNLTLALAAGTLKENQRMGEGNYALAGHHMVDKNVLFSPLYWKAKIGQKVYLTDETNIY
EYRVDTRKFIKATDVQVVDDIKGKKILTLVTCDDTGAGRLMIRAKFIKKMSHTKAPEAVQKEFSEKFNR
>Mature_228_residues
SKKLKNWLVSIGLTLLVLLSLAMIFNRQIKTWMVAQYNPEVNEKVVAKNTEKKANFDYTKVKSLDWQTVLKARTSEKRIK
VIGEIVYPDINIHLPIGKGVDNLTLALAAGTLKENQRMGEGNYALAGHHMVDKNVLFSPLYWKAKIGQKVYLTDETNIYE
YRVDTRKFIKATDVQVVDDIKGKKILTLVTCDDTGAGRLMIRAKFIKKMSHTKAPEAVQKEFSEKFNR

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 26135; Mature: 26004

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKLKNWLVSIGLTLLVLLSLAMIFNRQIKTWMVAQYNPEVNEKVVAKNTEKKANFDYT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCCEEECCCCCCCCCCCHH
KVKSLDWQTVLKARTSEKRIKVIGEIVYPDINIHLPIGKGVDNLTLALAAGTLKENQRMG
HCCCCCHHHHHHHHCCHHHHHHHHHEECCCCEEEEECCCCCCCEEEEEEECCHHHCCCCC
EGNYALAGHHMVDKNVLFSPLYWKAKIGQKVYLTDETNIYEYRVDTRKFIKATDVQVVDD
CCCEEEECCEEECCCCEECCEEEEECCCCEEEEECCCCEEEEEECHHHHHHHCCCEEECC
IKGKKILTLVTCDDTGAGRLMIRAKFIKKMSHTKAPEAVQKEFSEKFNR
CCCCEEEEEEEECCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKKLKNWLVSIGLTLLVLLSLAMIFNRQIKTWMVAQYNPEVNEKVVAKNTEKKANFDYT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCCEEECCCCCCCCCCCHH
KVKSLDWQTVLKARTSEKRIKVIGEIVYPDINIHLPIGKGVDNLTLALAAGTLKENQRMG
HCCCCCHHHHHHHHCCHHHHHHHHHEECCCCEEEEECCCCCCCEEEEEEECCHHHCCCCC
EGNYALAGHHMVDKNVLFSPLYWKAKIGQKVYLTDETNIYEYRVDTRKFIKATDVQVVDD
CCCEEEECCEEECCCCEECCEEEEECCCCEEEEECCCCEEEEEECHHHHHHHCCCEEECC
IKGKKILTLVTCDDTGAGRLMIRAKFIKKMSHTKAPEAVQKEFSEKFNR
CCCCEEEEEEEECCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]