| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is 116493243
Identifier: 116493243
GI number: 116493243
Start: 1472869
End: 1473198
Strand: Direct
Name: 116493243
Synonym: PEPE_1505
Alternate gene names: NA
Gene position: 1472869-1473198 (Clockwise)
Preceding gene: 116493227
Following gene: 116493244
Centisome position: 80.38
GC content: 36.36
Gene sequence:
>330_bases ATGGAAAGAAATATCGAAGCAAACCGTCTTTTTTGGACTAATTCCGAAGGTGTGCAAGTAGGACATGTACTCTATTCTAA AATTCCCGATCTTGATACTTTAATCTGTGAAGAAGTCTTTGTTAATCCTGAAGTTCGAGGGCAAGGCTGGGGTGGCAAAT TGATGAAAGACTTCATTAATTTTGCAATTGAAAATAACCAGAAAATTTATCCTCTTTGTCCCTTTGCAAGAAAATATTTT CTCAACCATCCGGAACTTTCCGAATGGAACATGCACGACCAAATTACAGCAACTAAAATACAAAGCTTAGTAAGTCGAAA GGAAGATTAA
Upstream 100 bases:
>100_bases CCTTTTATTGACCCACTTTGTAAACGGAAATCTGTTGAAGCAATTGACTTTATGCGCTTTCTTGGCGACAATGATTATTG TAGGAAAAGGAGGCTTATGT
Downstream 100 bases:
>100_bases GAAATGGATCAAAACGAATTAAAAAAACTAGTTGGCGAAGAAGCCGTTAAATTTATTGAAGATGGGATGACTGTGGGTTT AGGTACCGGTTCTACTGTTA
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MERNIEANRLFWTNSEGVQVGHVLYSKIPDLDTLICEEVFVNPEVRGQGWGGKLMKDFINFAIENNQKIYPLCPFARKYF LNHPELSEWNMHDQITATKIQSLVSRKED
Sequences:
>Translated_109_residues MERNIEANRLFWTNSEGVQVGHVLYSKIPDLDTLICEEVFVNPEVRGQGWGGKLMKDFINFAIENNQKIYPLCPFARKYF LNHPELSEWNMHDQITATKIQSLVSRKED >Mature_109_residues MERNIEANRLFWTNSEGVQVGHVLYSKIPDLDTLICEEVFVNPEVRGQGWGGKLMKDFINFAIENNQKIYPLCPFARKYF LNHPELSEWNMHDQITATKIQSLVSRKED
Specific function: Unknown
COG id: COG2388
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12743; Mature: 12743
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERNIEANRLFWTNSEGVQVGHVLYSKIPDLDTLICEEVFVNPEVRGQGWGGKLMKDFIN CCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH FAIENNQKIYPLCPFARKYFLNHPELSEWNMHDQITATKIQSLVSRKED HHHCCCCEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MERNIEANRLFWTNSEGVQVGHVLYSKIPDLDTLICEEVFVNPEVRGQGWGGKLMKDFIN CCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH FAIENNQKIYPLCPFARKYFLNHPELSEWNMHDQITATKIQSLVSRKED HHHCCCCEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA