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The map label for this gene is 116493101

Identifier: 116493101

GI number: 116493101

Start: 1341812

End: 1342489

Strand: Reverse

Name: 116493101

Synonym: PEPE_1355

Alternate gene names: NA

Gene position: 1342489-1341812 (Counterclockwise)

Preceding gene: 116493102

Following gene: 116493100

Centisome position: 73.26

GC content: 37.17

Gene sequence:

>678_bases
ATGTCAATTAAAGCTAAACTTTCAAAACTTTCTATCGCATTACTTTCTGGAGCAGCTCTTGGAGCAGCCATGATTACAAC
TACAAGTAGTAGTGCAAATGCTGATGAAATTTACACAGTAAAATCTGGTGATACTCTTTCAGAAATTAGTTATGCATTTG
GCTTAAATGGTGACTACAACTCTCTTGCAAAAGCAAATAATATTAAAGATGCAAATATTATTGAAGTTGGTCAAAAGCTG
GTTATCACAAATTCTGGTGATATCAAGAAAGCTACAAAATCAGAAGTTAACACTCTTCCAGAAGTAGCTAAGAACACAAA
TGCTGCAAACACAACAACAGCAAATACAACTGCAAGCACAACAACAAATAAGACAAACAAAACAACTGTTGCTAAGACAA
ATACAGTTGCAACATCAACACCAGCTACAACGGCTACAACATCAACTGTTTCTGGTGGTGAAGCTTCAGCTAAAGCATGG
ATTGCTAACAAGGAATCTGGTGGTTCATACTCAGCTACAAATGGACAATATGTTGGTAAATACCAATTGTCATCTTCATA
CCTAAATGGTGATTACTCAGCTGCTAACCAAGAACGTGTTGCTGATAACTACGTTAAGAGTCGTTACGGTAGCTGGTCAG
CTGCTAAGTCAGCTTGGTTATCACAAGGTTGGTACTAA

Upstream 100 bases:

>100_bases
CAAAATATATTTGTAACAAACGTCCTGTAAAGTAATTACCTGTTAAGAAGAAAACATAAAAATTAAAAAAATGATTTAAA
ACACAAGGAGATATTTCTAC

Downstream 100 bases:

>100_bases
AATTAGGTAATTAAATTCTAAAATTTATAAAAGAGGGACAAACTAATTAAGTTTGTCTCTCTTTTTTGATATTATATTCA
CATTTTTTTCGATAAAAAAG

Product: aggregation promoting factor-like surface protein

Products: NA

Alternate protein names: Extracellular Protein; Aggregation Promoting Factor-Like Surface Protein; LysM Domain Protein; Aggregation Promoting Factor; Agregation Promoting Protein; LysM Domain-Containing Protein; Surface Protein Aggregation Promoting Factor; Extracellular Surface Protein; Cell-Wall Hydrolase; Membrane Protease Subunit Stomatin/Prohibitin Family; Aggregation Promoting Factor Surface Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Cell Surface Protein; LysM Repeat-Containing Protein; Aggregation Promoting Factrelated Surface Protein

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSIKAKLSKLSIALLSGAALGAAMITTTSSSANADEIYTVKSGDTLSEISYAFGLNGDYNSLAKANNIKDANIIEVGQKL
VITNSGDIKKATKSEVNTLPEVAKNTNAANTTTANTTASTTTNKTNKTTVAKTNTVATSTPATTATTSTVSGGEASAKAW
IANKESGGSYSATNGQYVGKYQLSSSYLNGDYSAANQERVADNYVKSRYGSWSAAKSAWLSQGWY

Sequences:

>Translated_225_residues
MSIKAKLSKLSIALLSGAALGAAMITTTSSSANADEIYTVKSGDTLSEISYAFGLNGDYNSLAKANNIKDANIIEVGQKL
VITNSGDIKKATKSEVNTLPEVAKNTNAANTTTANTTASTTTNKTNKTTVAKTNTVATSTPATTATTSTVSGGEASAKAW
IANKESGGSYSATNGQYVGKYQLSSSYLNGDYSAANQERVADNYVKSRYGSWSAAKSAWLSQGWY
>Mature_224_residues
SIKAKLSKLSIALLSGAALGAAMITTTSSSANADEIYTVKSGDTLSEISYAFGLNGDYNSLAKANNIKDANIIEVGQKLV
ITNSGDIKKATKSEVNTLPEVAKNTNAANTTTANTTASTTTNKTNKTTVAKTNTVATSTPATTATTSTVSGGEASAKAWI
ANKESGGSYSATNGQYVGKYQLSSSYLNGDYSAANQERVADNYVKSRYGSWSAAKSAWLSQGWY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23381; Mature: 23250

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKAKLSKLSIALLSGAALGAAMITTTSSSANADEIYTVKSGDTLSEISYAFGLNGDYN
CCCHHHHHHHHHHHHHCCHHCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCCCHH
SLAKANNIKDANIIEVGQKLVITNSGDIKKATKSEVNTLPEVAKNTNAANTTTANTTAST
HHHHHCCCCCCHHEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TTNKTNKTTVAKTNTVATSTPATTATTSTVSGGEASAKAWIANKESGGSYSATNGQYVGK
CCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEE
YQLSSSYLNGDYSAANQERVADNYVKSRYGSWSAAKSAWLSQGWY
EEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SIKAKLSKLSIALLSGAALGAAMITTTSSSANADEIYTVKSGDTLSEISYAFGLNGDYN
CCHHHHHHHHHHHHHCCHHCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCCCHH
SLAKANNIKDANIIEVGQKLVITNSGDIKKATKSEVNTLPEVAKNTNAANTTTANTTAST
HHHHHCCCCCCHHEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TTNKTNKTTVAKTNTVATSTPATTATTSTVSGGEASAKAWIANKESGGSYSATNGQYVGK
CCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEE
YQLSSSYLNGDYSAANQERVADNYVKSRYGSWSAAKSAWLSQGWY
EEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA