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The map label for this gene is yrbF [H]

Identifier: 116493016

GI number: 116493016

Start: 1255697

End: 1256071

Strand: Reverse

Name: yrbF [H]

Synonym: PEPE_1268

Alternate gene names: 116493016

Gene position: 1256071-1255697 (Counterclockwise)

Preceding gene: 116493017

Following gene: 116493015

Centisome position: 68.55

GC content: 36.8

Gene sequence:

>375_bases
ATGTTATTAGCAGCTGCAAATGGTGGTTTCGGAATGAGTTCAATCATTTTCTTTGTTTTAATCATTGGATTGATGTACTT
CATGATGATCAGACCACAACGTAAACAACAACAAAAGCGCCAAGAAATGATGAATCAATTGAACGTTGGAGACAATGTTG
TAACAATTGGTCGTCTTCATGGGGTGGTTGATTCAATTAATGAAGAGGAAAAAACTGTTACTTTAGATTGTGATGGTATT
TACCTAGTTTTTGATCGTATGGCAATCATGCGGGTCGAAAAGAAGGCTCTTACGACAACTGAAACAACTGAAACTAAAGA
AGAAGCTCCCGTAAAGGAAGCCGAACCTGAAGAAACAACTGAAAAAGAAGAATAA

Upstream 100 bases:

>100_bases
ACGGATATAATAAGGAAAATAGTAAGAATTTCTAAGAGTACTGGTTTAGAAAACGTATTTTTGGTACAGTATACTTAGAC
GACTTTAGTGAGGTGAAAAA

Downstream 100 bases:

>100_bases
TTTTTCAAACTTAGACCGCGAATTTTAATTCGTGGGTCTTTTTTTTCTTGTTTGAAGTTTTAAAATGGTAGATAATTAAT
CTATATGAAAAGCGAAAGCG

Product: protein translocase subunit yajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MLLAAANGGFGMSSIIFFVLIIGLMYFMMIRPQRKQQQKRQEMMNQLNVGDNVVTIGRLHGVVDSINEEEKTVTLDCDGI
YLVFDRMAIMRVEKKALTTTETTETKEEAPVKEAEPEETTEKEE

Sequences:

>Translated_124_residues
MLLAAANGGFGMSSIIFFVLIIGLMYFMMIRPQRKQQQKRQEMMNQLNVGDNVVTIGRLHGVVDSINEEEKTVTLDCDGI
YLVFDRMAIMRVEKKALTTTETTETKEEAPVKEAEPEETTEKEE
>Mature_124_residues
MLLAAANGGFGMSSIIFFVLIIGLMYFMMIRPQRKQQQKRQEMMNQLNVGDNVVTIGRLHGVVDSINEEEKTVTLDCDGI
YLVFDRMAIMRVEKKALTTTETTETKEEAPVKEAEPEETTEKEE

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 14092; Mature: 14092

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00079 MULTICOPPER_OXIDASE1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLAAANGGFGMSSIIFFVLIIGLMYFMMIRPQRKQQQKRQEMMNQLNVGDNVVTIGRLH
CEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHH
GVVDSINEEEKTVTLDCDGIYLVFDRMAIMRVEKKALTTTETTETKEEAPVKEAEPEETT
HHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCC
EKEE
CCCC
>Mature Secondary Structure
MLLAAANGGFGMSSIIFFVLIIGLMYFMMIRPQRKQQQKRQEMMNQLNVGDNVVTIGRLH
CEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHH
GVVDSINEEEKTVTLDCDGIYLVFDRMAIMRVEKKALTTTETTETKEEAPVKEAEPEETT
HHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCC
EKEE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]