| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is zwf [H]
Identifier: 116493015
GI number: 116493015
Start: 1254098
End: 1255585
Strand: Reverse
Name: zwf [H]
Synonym: PEPE_1267
Alternate gene names: 116493015
Gene position: 1255585-1254098 (Counterclockwise)
Preceding gene: 116493016
Following gene: 116493014
Centisome position: 68.52
GC content: 37.5
Gene sequence:
>1488_bases ATGAATCAAAAGGCTTTATTTATTATTTTTGGCGGAACAGGCGACTTAGCTTATCGAAAATTATATCCGGCGTTATTTAA TTTATACGAAAAAGGATATTTAAAAGAGGATTTTGCTGTAATTGGTACAGCACGCCGTCCGTGGTCTAACGATCACTACC ATGAAGTAGTTATGAGTGCAATTGAAGACGCAGGCCGTGATTCTGGTCGGACTAACGATGACCTACCTCGCAAATTTGCA AGCCATTTCTACTATCAATCACATAATGTTGATGATGTCGATCATTATGTAGCTTTACGTAAATTAGCAGATGAATTGGA TGAAAAGTATGATCTTCAAGGAAATCGTATTTTTTATTTAGCAATGGCACCAAGATTCTTTGGAACAATTGCCGGCCATC TGAAAGATCAAGCTTTACTTACAAAGGGAAATGGTTTTAACCGATTAATTATCGAAAAACCCTTCGGACGTGACTATCCC AGTGCTAAAGAATTGAACGATTCAATTTCGGGTTCCTTTAAAGAAGAACAGATTTTTAGAATTGATCATTATTTAGGTAA GGAACCGATCCAGTCAATTGCTGGATTACGGTTTGGGAACGCATTGTTCAACTCGCTTTGGAATAAAGAACATATTGATA ACATTCAGATTACCCTATCTGAATCACTTGGTGTCGAAGAACGGGCTGGATACTATGAAACAGCTGGGGCAATGCGGGAT ATGGTCCAAAATCATATTATGCAAATTGTTTCGTTACTTACAATGGAACGGCCAGATGTTTTTGATTCAGAACATTTACG TGACAAGAAAATTGAAGCTTTGGAAAATATCCAAATGTATACCAAAGAAGAAGCTAAAAAATATTTCATTCGTGGCCAAT ACGGTGCAGATGAGGCTAATACACAACTTGGATACCGAGATGAAGAAGGTACGGATAATCAATCAACTGTTGAAACTTTC GTTGCCGGTAAATTAATTACACATAATCCGTCATTAGATGGTGTACCAGTTTATATTCGTACTGGGAAACGATTAACTAA AAAATCAACTCAGATTAACATTGTATTTAAAAATGATGATCAAAACATTTTTGCTAAAGACGCGTCAGAAAAATTAAAGA CCAATGTTTTGACTATGCATATTGAACCTGATCAAGGGTTTACACTAGAATTTAATACAAAGACTGGAAACCAAGGTTAC AACCTTTCCCCAGTTCATTTACGTTATCGTAAGACAGCCACTGAAAAGGCTCAAATTCCAGATGCTTACGAAGGTTTGAT TCGCGATGCTTTAATGGGAAATAAGACTAATTTTGCACATTGGCATGAAGTTAGCCAAGCATGGAAGATTATGGATGTAG TCCGCGAGGCTTGGGATGAAGAAGAACCCGCATTTCCAAACTATGCAAGTGGTAGTATGGGACCTGAAGCAGCTATGCAA CTTCTAGCTGATGATGGACGTAAATGGGTTTTTAATCCACGCAGCTAA
Upstream 100 bases:
>100_bases TAGACCGCGAATTTTAATTCGTGGGTCTTTTTTTTCTTGTTTGAAGTTTTAAAATGGTAGATAATTAATCTATATGAAAA GCGAAAGCGGGGTTATAAAA
Downstream 100 bases:
>100_bases TAATGGAAACAGAAGTTTTAACTCCGATCAACATTGATGATTCTCGTAAGATAATTCATGTTGATATGGACGCCTTTTAT GCTTCAATTGAGATGCGAGA
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MNQKALFIIFGGTGDLAYRKLYPALFNLYEKGYLKEDFAVIGTARRPWSNDHYHEVVMSAIEDAGRDSGRTNDDLPRKFA SHFYYQSHNVDDVDHYVALRKLADELDEKYDLQGNRIFYLAMAPRFFGTIAGHLKDQALLTKGNGFNRLIIEKPFGRDYP SAKELNDSISGSFKEEQIFRIDHYLGKEPIQSIAGLRFGNALFNSLWNKEHIDNIQITLSESLGVEERAGYYETAGAMRD MVQNHIMQIVSLLTMERPDVFDSEHLRDKKIEALENIQMYTKEEAKKYFIRGQYGADEANTQLGYRDEEGTDNQSTVETF VAGKLITHNPSLDGVPVYIRTGKRLTKKSTQINIVFKNDDQNIFAKDASEKLKTNVLTMHIEPDQGFTLEFNTKTGNQGY NLSPVHLRYRKTATEKAQIPDAYEGLIRDALMGNKTNFAHWHEVSQAWKIMDVVREAWDEEEPAFPNYASGSMGPEAAMQ LLADDGRKWVFNPRS
Sequences:
>Translated_495_residues MNQKALFIIFGGTGDLAYRKLYPALFNLYEKGYLKEDFAVIGTARRPWSNDHYHEVVMSAIEDAGRDSGRTNDDLPRKFA SHFYYQSHNVDDVDHYVALRKLADELDEKYDLQGNRIFYLAMAPRFFGTIAGHLKDQALLTKGNGFNRLIIEKPFGRDYP SAKELNDSISGSFKEEQIFRIDHYLGKEPIQSIAGLRFGNALFNSLWNKEHIDNIQITLSESLGVEERAGYYETAGAMRD MVQNHIMQIVSLLTMERPDVFDSEHLRDKKIEALENIQMYTKEEAKKYFIRGQYGADEANTQLGYRDEEGTDNQSTVETF VAGKLITHNPSLDGVPVYIRTGKRLTKKSTQINIVFKNDDQNIFAKDASEKLKTNVLTMHIEPDQGFTLEFNTKTGNQGY NLSPVHLRYRKTATEKAQIPDAYEGLIRDALMGNKTNFAHWHEVSQAWKIMDVVREAWDEEEPAFPNYASGSMGPEAAMQ LLADDGRKWVFNPRS >Mature_495_residues MNQKALFIIFGGTGDLAYRKLYPALFNLYEKGYLKEDFAVIGTARRPWSNDHYHEVVMSAIEDAGRDSGRTNDDLPRKFA SHFYYQSHNVDDVDHYVALRKLADELDEKYDLQGNRIFYLAMAPRFFGTIAGHLKDQALLTKGNGFNRLIIEKPFGRDYP SAKELNDSISGSFKEEQIFRIDHYLGKEPIQSIAGLRFGNALFNSLWNKEHIDNIQITLSESLGVEERAGYYETAGAMRD MVQNHIMQIVSLLTMERPDVFDSEHLRDKKIEALENIQMYTKEEAKKYFIRGQYGADEANTQLGYRDEEGTDNQSTVETF VAGKLITHNPSLDGVPVYIRTGKRLTKKSTQINIVFKNDDQNIFAKDASEKLKTNVLTMHIEPDQGFTLEFNTKTGNQGY NLSPVHLRYRKTATEKAQIPDAYEGLIRDALMGNKTNFAHWHEVSQAWKIMDVVREAWDEEEPAFPNYASGSMGPEAAMQ LLADDGRKWVFNPRS
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI109389365, Length=500, Percent_Identity=31.6, Blast_Score=262, Evalue=5e-70, Organism=Homo sapiens, GI108773793, Length=500, Percent_Identity=31.6, Blast_Score=262, Evalue=5e-70, Organism=Homo sapiens, GI52145310, Length=367, Percent_Identity=28.0653950953678, Blast_Score=145, Evalue=1e-34, Organism=Escherichia coli, GI1788158, Length=493, Percent_Identity=34.4827586206897, Blast_Score=311, Evalue=6e-86, Organism=Caenorhabditis elegans, GI17538218, Length=498, Percent_Identity=32.1285140562249, Blast_Score=274, Evalue=8e-74, Organism=Saccharomyces cerevisiae, GI6324088, Length=478, Percent_Identity=33.6820083682008, Blast_Score=288, Evalue=2e-78, Organism=Drosophila melanogaster, GI24643352, Length=482, Percent_Identity=31.5352697095436, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24643350, Length=482, Percent_Identity=31.5352697095436, Blast_Score=259, Evalue=4e-69, Organism=Drosophila melanogaster, GI221513548, Length=484, Percent_Identity=26.8595041322314, Blast_Score=184, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 56610; Mature: 56610
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKALFIIFGGTGDLAYRKLYPALFNLYEKGYLKEDFAVIGTARRPWSNDHYHEVVMSA CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCCHHHHHHHHH IEDAGRDSGRTNDDLPRKFASHFYYQSHNVDDVDHYVALRKLADELDEKYDLQGNRIFYL HHHCCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE AMAPRFFGTIAGHLKDQALLTKGNGFNRLIIEKPFGRDYPSAKELNDSISGSFKEEQIFR EECHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCCHHHHCHHHCCCCCHHHHHH IDHYLGKEPIQSIAGLRFGNALFNSLWNKEHIDNIQITLSESLGVEERAGYYETAGAMRD HHHHHCHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHH MVQNHIMQIVSLLTMERPDVFDSEHLRDKKIEALENIQMYTKEEAKKYFIRGQYGADEAN HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC TQLGYRDEEGTDNQSTVETFVAGKLITHNPSLDGVPVYIRTGKRLTKKSTQINIVFKNDD CCCCCCCCCCCCCHHHHHHHHHCEEEECCCCCCCEEEEEECCCHHHCCCCEEEEEEECCC QNIFAKDASEKLKTNVLTMHIEPDQGFTLEFNTKTGNQGYNLSPVHLRYRKTATEKAQIP CCEECCCHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHCCCC DAYEGLIRDALMGNKTNFAHWHEVSQAWKIMDVVREAWDEEEPAFPNYASGSMGPEAAMQ HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH LLADDGRKWVFNPRS HHHCCCCEEECCCCC >Mature Secondary Structure MNQKALFIIFGGTGDLAYRKLYPALFNLYEKGYLKEDFAVIGTARRPWSNDHYHEVVMSA CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCCHHHHHHHHH IEDAGRDSGRTNDDLPRKFASHFYYQSHNVDDVDHYVALRKLADELDEKYDLQGNRIFYL HHHCCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE AMAPRFFGTIAGHLKDQALLTKGNGFNRLIIEKPFGRDYPSAKELNDSISGSFKEEQIFR EECHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCCHHHHCHHHCCCCCHHHHHH IDHYLGKEPIQSIAGLRFGNALFNSLWNKEHIDNIQITLSESLGVEERAGYYETAGAMRD HHHHHCHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHH MVQNHIMQIVSLLTMERPDVFDSEHLRDKKIEALENIQMYTKEEAKKYFIRGQYGADEAN HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC TQLGYRDEEGTDNQSTVETFVAGKLITHNPSLDGVPVYIRTGKRLTKKSTQINIVFKNDD CCCCCCCCCCCCCHHHHHHHHHCEEEECCCCCCCEEEEEECCCHHHCCCCEEEEEEECCC QNIFAKDASEKLKTNVLTMHIEPDQGFTLEFNTKTGNQGYNLSPVHLRYRKTATEKAQIP CCEECCCHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHCCCC DAYEGLIRDALMGNKTNFAHWHEVSQAWKIMDVVREAWDEEEPAFPNYASGSMGPEAAMQ HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH LLADDGRKWVFNPRS HHHCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11463916; 9466257; 9533725 [H]