| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is fruA [H]
Identifier: 116492925
GI number: 116492925
Start: 1162903
End: 1164816
Strand: Reverse
Name: fruA [H]
Synonym: PEPE_1164
Alternate gene names: 116492925
Gene position: 1164816-1162903 (Counterclockwise)
Preceding gene: 116492926
Following gene: 116492924
Centisome position: 63.57
GC content: 39.71
Gene sequence:
>1914_bases ATGGAGATTAAAGATTTACTCAAGAAAAACTTAATGATTATGGATCTAAAAGCAGATTCAAAATCGGATGCAATTAACGA AATGATTGATAAATACGTTAGTGAAGGAATTGTTGCCGATCGTGCGACCTATCTTAAAGGTATTCTAGATCGTGAAGCTG AATCAACAACTGGTATTGGTGATGAGATTGCGATGCCTCATGCTAAGACTAATGCTGTTAATGAGGCAGCGGTGTTATTT GCTAAAAGTAGTAATGGGGTGGATTTTGATGCCTTGGATGGAAAACCTGTAAAATTATTCTTCATGATTGCTGCTCCAGA GGGGGCGAATAACGCGCATCTACAGGCCTTAGCTAAACTATCTAGTTTGCTGATTGACCCAGAGTTGGTAGGAAAATTGA AGAACGCTGAAACTCCAGCGGATGTCTTAGCATTATTTGAAGCTGCAGAAGCAGCAAAAGATGTAGAAGATTCACATGAT GCTGAAACAACTGAACCAGTCGATTCAGATAAAAAGTCCTTTATTGTTGCGGTTTCAGCTTGTCCTAATGGGATTGCTCA TACTTATATGGCTGAGGCTGCTTTGAAAAAGGCGGCTAAGGAAAAAGGAATCGAGATCAAAGTTGAAACAAATGGTTCCG AAGGTGTAAAGCATCGTTTAACTAATGAAGATATTGAACGAGCTGATGGAGTTATCATTACAGCAGATAAAAAAGTTGAA ATGGCGCGTTTCGATGGTAAACCACTTTTAAATCGACCAGTCATTGATGGGATTAATAAAGCTGATGAATTAATTGACTT GGTTGAAGCTAATCAGGCTACTACATTCCATTCTACTGGAAATGAAGCGTCAGAATCTGAATCATCAAACGGTGGTTTTT GGAATGAAATTTATAAAGATTTAATGAACGGTATTTCTCATATGCTACCATTTGTAGTTGGTGGTGGGATTATCATGGCT CTTTCGTTCTTTATTGAGCGATATACGTCAGCAACTAGTTTGTGGTTTACTTTCCCTAATGGAATTGGTAATTATGCCTT TTCATTCTTGATCCCAATTCTTGCCGGTTTTATTGCTCAATCAATTGGTGATTTACCAGCGTTAATGCCTGGGGTTGTGG GTGGTTATATGGCAACCCAGTCAGCTGCGAGCGTAATGCATACAACAAGTGTTTCAGGATTTATTGGTGGATTAATTGCT GGTTTTGCAGCTGGTTTGATTGTCAACGGTTTGAAAAAGTTATTCAAATTTGTTCCTAAGACACTTGAAGGTTTAAAACC AATGTTGATTTATCCAATCTTGAGTTTACTTTTGGTTGGCGCATTAATGTTCTTTGCAGTTAACCCCGTGTTTGCGGCCG TTAATGCATGGGTAACTGGTGTGCTAGAAGGCATGGGAACCGGAAACGCGGTTCTCTTAGGTGCTGTACTGGCAGCGATG ATGTCAATTGATATGGGTGGTCCATTTAATAAGGCTGCTTATGCGTTTGCGATTGCAGCGTTTACTTCAACTAAAAATGG TGATTTGATGGCTGCTGTAATGGTGGGTGGGATGATTCCACCTTTAGCTACAGCAATTGCCACAACATTTTGGCCTAAGA AATTTACGGCACAAGAACGTGAAGCTGGAATTTCAAACTGGGTTCTGGGACTATCATTTATTACTGAAGGTGCCATTCCA TTCGCAACTGCTGATCCTCTTCGTGTAATTGGATCAAGTATTATTGGTTCAGCAATCGGTGGTGGACTAAGTCAACTTTG GAAGGTTAGTGTTCCGGCTCCTCATGGTGGTATATGGGTAATTGCGTTAGCTGATCATAAATTATTCTACGTTCTATCTG TAGTAATTGGTGCGGTAATAGCCGGTGTAATTATGGGATTATGGAAACCAGTAAAGAATTCAAAAAATGCATAA
Upstream 100 bases:
>100_bases GTGGAAGTGCCACAGCATTTTCACTGGATATTGCAACTAATAAAAAAATTGACGAGATTTTTAACGAAATTGATGTCTTT GAAAAGTAAGGGGTAAAATT
Downstream 100 bases:
>100_bases AAATTCATTTTTATGTATAAAAAATATGGTTTAACTTGGGAGTATTGTTACATTCTTTGTAACAATACTCTTTTTTTGTA ATATTGGTGTAACATTAGAT
Product: fusion of IIA, IIB and IIC component of mannitol/fructose-specific phosphotransferase system mannitol/fructose-specific
Products: NA
Alternate protein names: EIIABC-Fru; Fructose-specific phosphotransferase enzyme IIA component; EII-Fru; PTS system fructose-specific EIIA component; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MEIKDLLKKNLMIMDLKADSKSDAINEMIDKYVSEGIVADRATYLKGILDREAESTTGIGDEIAMPHAKTNAVNEAAVLF AKSSNGVDFDALDGKPVKLFFMIAAPEGANNAHLQALAKLSSLLIDPELVGKLKNAETPADVLALFEAAEAAKDVEDSHD AETTEPVDSDKKSFIVAVSACPNGIAHTYMAEAALKKAAKEKGIEIKVETNGSEGVKHRLTNEDIERADGVIITADKKVE MARFDGKPLLNRPVIDGINKADELIDLVEANQATTFHSTGNEASESESSNGGFWNEIYKDLMNGISHMLPFVVGGGIIMA LSFFIERYTSATSLWFTFPNGIGNYAFSFLIPILAGFIAQSIGDLPALMPGVVGGYMATQSAASVMHTTSVSGFIGGLIA GFAAGLIVNGLKKLFKFVPKTLEGLKPMLIYPILSLLLVGALMFFAVNPVFAAVNAWVTGVLEGMGTGNAVLLGAVLAAM MSIDMGGPFNKAAYAFAIAAFTSTKNGDLMAAVMVGGMIPPLATAIATTFWPKKFTAQEREAGISNWVLGLSFITEGAIP FATADPLRVIGSSIIGSAIGGGLSQLWKVSVPAPHGGIWVIALADHKLFYVLSVVIGAVIAGVIMGLWKPVKNSKNA
Sequences:
>Translated_637_residues MEIKDLLKKNLMIMDLKADSKSDAINEMIDKYVSEGIVADRATYLKGILDREAESTTGIGDEIAMPHAKTNAVNEAAVLF AKSSNGVDFDALDGKPVKLFFMIAAPEGANNAHLQALAKLSSLLIDPELVGKLKNAETPADVLALFEAAEAAKDVEDSHD AETTEPVDSDKKSFIVAVSACPNGIAHTYMAEAALKKAAKEKGIEIKVETNGSEGVKHRLTNEDIERADGVIITADKKVE MARFDGKPLLNRPVIDGINKADELIDLVEANQATTFHSTGNEASESESSNGGFWNEIYKDLMNGISHMLPFVVGGGIIMA LSFFIERYTSATSLWFTFPNGIGNYAFSFLIPILAGFIAQSIGDLPALMPGVVGGYMATQSAASVMHTTSVSGFIGGLIA GFAAGLIVNGLKKLFKFVPKTLEGLKPMLIYPILSLLLVGALMFFAVNPVFAAVNAWVTGVLEGMGTGNAVLLGAVLAAM MSIDMGGPFNKAAYAFAIAAFTSTKNGDLMAAVMVGGMIPPLATAIATTFWPKKFTAQEREAGISNWVLGLSFITEGAIP FATADPLRVIGSSIIGSAIGGGLSQLWKVSVPAPHGGIWVIALADHKLFYVLSVVIGAVIAGVIMGLWKPVKNSKNA >Mature_637_residues MEIKDLLKKNLMIMDLKADSKSDAINEMIDKYVSEGIVADRATYLKGILDREAESTTGIGDEIAMPHAKTNAVNEAAVLF AKSSNGVDFDALDGKPVKLFFMIAAPEGANNAHLQALAKLSSLLIDPELVGKLKNAETPADVLALFEAAEAAKDVEDSHD AETTEPVDSDKKSFIVAVSACPNGIAHTYMAEAALKKAAKEKGIEIKVETNGSEGVKHRLTNEDIERADGVIITADKKVE MARFDGKPLLNRPVIDGINKADELIDLVEANQATTFHSTGNEASESESSNGGFWNEIYKDLMNGISHMLPFVVGGGIIMA LSFFIERYTSATSLWFTFPNGIGNYAFSFLIPILAGFIAQSIGDLPALMPGVVGGYMATQSAASVMHTTSVSGFIGGLIA GFAAGLIVNGLKKLFKFVPKTLEGLKPMLIYPILSLLLVGALMFFAVNPVFAAVNAWVTGVLEGMGTGNAVLLGAVLAAM MSIDMGGPFNKAAYAFAIAAFTSTKNGDLMAAVMVGGMIPPLATAIATTFWPKKFTAQEREAGISNWVLGLSFITEGAIP FATADPLRVIGSSIIGSAIGGGLSQLWKVSVPAPHGGIWVIALADHKLFYVLSVVIGAVIAGVIMGLWKPVKNSKNA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=463, Percent_Identity=40.8207343412527, Blast_Score=326, Evalue=3e-90, Organism=Escherichia coli, GI1786951, Length=652, Percent_Identity=31.1349693251534, Blast_Score=301, Evalue=7e-83, Organism=Escherichia coli, GI87082348, Length=470, Percent_Identity=33.1914893617021, Blast_Score=215, Evalue=9e-57, Organism=Escherichia coli, GI1790386, Length=318, Percent_Identity=36.7924528301887, Blast_Score=172, Evalue=5e-44, Organism=Escherichia coli, GI1788729, Length=384, Percent_Identity=29.9479166666667, Blast_Score=124, Evalue=3e-29, Organism=Escherichia coli, GI1790387, Length=102, Percent_Identity=48.0392156862745, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1788730, Length=96, Percent_Identity=38.5416666666667, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI2367327, Length=133, Percent_Identity=24.812030075188, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1789597, Length=155, Percent_Identity=25.8064516129032, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR004715 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF00359 PTS_EIIA_2; PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 67238; Mature: 67238
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00372 PTS_EIIA_TYPE_2_HIS ; PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKDLLKKNLMIMDLKADSKSDAINEMIDKYVSEGIVADRATYLKGILDREAESTTGIG CCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC DEIAMPHAKTNAVNEAAVLFAKSSNGVDFDALDGKPVKLFFMIAAPEGANNAHLQALAKL CHHCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCEEEEEEEECCCCCCHHHHHHHHHH SSLLIDPELVGKLKNAETPADVLALFEAAEAAKDVEDSHDAETTEPVDSDKKSFIVAVSA HHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC CPNGIAHTYMAEAALKKAAKEKGIEIKVETNGSEGVKHRLTNEDIERADGVIITADKKVE CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCHHHHHHCCEEEEECCCEE MARFDGKPLLNRPVIDGINKADELIDLVEANQATTFHSTGNEASESESSNGGFWNEIYKD HHHCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH LMNGISHMLPFVVGGGIIMALSFFIERYTSATSLWFTFPNGIGNYAFSFLIPILAGFIAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH SIGDLPALMPGVVGGYMATQSAASVMHTTSVSGFIGGLIAGFAAGLIVNGLKKLFKFVPK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLEGLKPMLIYPILSLLLVGALMFFAVNPVFAAVNAWVTGVLEGMGTGNAVLLGAVLAAM HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MSIDMGGPFNKAAYAFAIAAFTSTKNGDLMAAVMVGGMIPPLATAIATTFWPKKFTAQER HHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHCCHHH EAGISNWVLGLSFITEGAIPFATADPLRVIGSSIIGSAIGGGLSQLWKVSVPAPHGGIWV HCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCEEE IALADHKLFYVLSVVIGAVIAGVIMGLWKPVKNSKNA EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MEIKDLLKKNLMIMDLKADSKSDAINEMIDKYVSEGIVADRATYLKGILDREAESTTGIG CCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC DEIAMPHAKTNAVNEAAVLFAKSSNGVDFDALDGKPVKLFFMIAAPEGANNAHLQALAKL CHHCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCEEEEEEEECCCCCCHHHHHHHHHH SSLLIDPELVGKLKNAETPADVLALFEAAEAAKDVEDSHDAETTEPVDSDKKSFIVAVSA HHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC CPNGIAHTYMAEAALKKAAKEKGIEIKVETNGSEGVKHRLTNEDIERADGVIITADKKVE CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCHHHHHHCCEEEEECCCEE MARFDGKPLLNRPVIDGINKADELIDLVEANQATTFHSTGNEASESESSNGGFWNEIYKD HHHCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH LMNGISHMLPFVVGGGIIMALSFFIERYTSATSLWFTFPNGIGNYAFSFLIPILAGFIAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH SIGDLPALMPGVVGGYMATQSAASVMHTTSVSGFIGGLIAGFAAGLIVNGLKKLFKFVPK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLEGLKPMLIYPILSLLLVGALMFFAVNPVFAAVNAWVTGVLEGMGTGNAVLLGAVLAAM HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MSIDMGGPFNKAAYAFAIAAFTSTKNGDLMAAVMVGGMIPPLATAIATTFWPKKFTAQER HHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHCCHHH EAGISNWVLGLSFITEGAIPFATADPLRVIGSSIIGSAIGGGLSQLWKVSVPAPHGGIWV HCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCEEE IALADHKLFYVLSVVIGAVIAGVIMGLWKPVKNSKNA EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]