| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is 116492694
Identifier: 116492694
GI number: 116492694
Start: 931294
End: 931785
Strand: Direct
Name: 116492694
Synonym: PEPE_0929
Alternate gene names: NA
Gene position: 931294-931785 (Clockwise)
Preceding gene: 116492693
Following gene: 116492695
Centisome position: 50.82
GC content: 34.96
Gene sequence:
>492_bases ATGGCAGAAAAAAATAATAAGCATCCATTTTGGTTAATCGCCTTTATTGTCATTGCAACGGTTGTGGGCTCAATATTTAT TATCGTGCAAGAAATTAATCGACCAGAGCGCTATGACAGTAAGGTAGCAACCGAAATTGCAAAGAAAAATACCGATTTAA AGAAAGTCGATCGAGTAACTCGATTTGTATATAATCAGGTTGAATATACGGTCTCTGGAACCAAGGCTAATGGAAATAGT ATTTTCGTTGTGCTTACGGATAACGGCAAAAAGGCTACAGTATATGACCAAACGGCAGGTGTAAGTGAACAAAAAGCCAT CGCTAGTGTTCAAAGTAATCCTAATCTGAAGAAAATTACTTCTAGTCGATTTGGAATTATTAAAAACAAACCAGTCTGGA TGGTTTCTTATATCAACCAAAAAGATAGATTAGTTACTAAAACGATTAACTTTAAAACGGGTGAAGAACTCAAAACCATT ACAACATACTAA
Upstream 100 bases:
>100_bases CAAAGAAAGAGTGAATAATTTCTTTAATAATCAAGAATAGCTTTCTTTGAAGCTGACTTTTGATATATAATCATTTTGTT AGTGTTAGACGAGGGGTATT
Downstream 100 bases:
>100_bases TAGGAGGAACAAATGCAAGATTTACTTCTTAGTTTTTTAGAGGACGGGAGTATCAGCATTGCTAACTTTTTATTAGATAA CTATGCAAAACTCGGCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MAEKNNKHPFWLIAFIVIATVVGSIFIIVQEINRPERYDSKVATEIAKKNTDLKKVDRVTRFVYNQVEYTVSGTKANGNS IFVVLTDNGKKATVYDQTAGVSEQKAIASVQSNPNLKKITSSRFGIIKNKPVWMVSYINQKDRLVTKTINFKTGEELKTI TTY
Sequences:
>Translated_163_residues MAEKNNKHPFWLIAFIVIATVVGSIFIIVQEINRPERYDSKVATEIAKKNTDLKKVDRVTRFVYNQVEYTVSGTKANGNS IFVVLTDNGKKATVYDQTAGVSEQKAIASVQSNPNLKKITSSRFGIIKNKPVWMVSYINQKDRLVTKTINFKTGEELKTI TTY >Mature_162_residues AEKNNKHPFWLIAFIVIATVVGSIFIIVQEINRPERYDSKVATEIAKKNTDLKKVDRVTRFVYNQVEYTVSGTKANGNSI FVVLTDNGKKATVYDQTAGVSEQKAIASVQSNPNLKKITSSRFGIIKNKPVWMVSYINQKDRLVTKTINFKTGEELKTIT TY
Specific function: Unknown
COG id: COG5353
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18408; Mature: 18277
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKNNKHPFWLIAFIVIATVVGSIFIIVQEINRPERYDSKVATEIAKKNTDLKKVDRVT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHH RFVYNQVEYTVSGTKANGNSIFVVLTDNGKKATVYDQTAGVSEQKAIASVQSNPNLKKIT HHHHHHEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHH SSRFGIIKNKPVWMVSYINQKDRLVTKTINFKTGEELKTITTY HCCCCEECCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEECC >Mature Secondary Structure AEKNNKHPFWLIAFIVIATVVGSIFIIVQEINRPERYDSKVATEIAKKNTDLKKVDRVT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHH RFVYNQVEYTVSGTKANGNSIFVVLTDNGKKATVYDQTAGVSEQKAIASVQSNPNLKKIT HHHHHHEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHH SSRFGIIKNKPVWMVSYINQKDRLVTKTINFKTGEELKTITTY HCCCCEECCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA