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The map label for this gene is recN [H]

Identifier: 116492590

GI number: 116492590

Start: 827875

End: 829551

Strand: Direct

Name: recN [H]

Synonym: PEPE_0823

Alternate gene names: 116492590

Gene position: 827875-829551 (Clockwise)

Preceding gene: 116492589

Following gene: 116492592

Centisome position: 45.18

GC content: 37.57

Gene sequence:

>1677_bases
ATGTTATTGGAATTATCTATAAAGGATTTCGCAATTATCGAGAAGCTTGATGTTAGTTTCAACCAAGGAATGACTGTTCT
GACGGGAGAAACTGGTGCAGGTAAGTCAATTATTATTGATGCCGTAGGACTTTTAGCTGGTGGAAGAGGCTCAGCAGATT
TTGTAAGAACCGGCGCAGACAAGGCGGTTCTACAAGGTGTTTTTGATATCGCTGAGATTGATAATACTAAAAATGCGTTA
ATTAAGTTAGGAATCGACGCAACCAATGATTTAGTGATTACTCGGGAACTCCATAAGGGTGGTCGAAGTGTTTGTCGAAT
CAATGGCACGATCGTTAATCTAAATAGTCTAAAATCAGTCGGAGAAACTTTAATTGATATTCACGGACAAAATGAACATC
AAGAACTAATGAATAGTGAAAAACATCTAGCATTGTTAGATCATTTTGACGAAAAAATGGTTGGTAAAGTCCGTGCTAAA
TATGAAGAAGCTTACGCTGATTATTCTAAATTAAACCAACAATTAAATAAAAGTCGTAAGAACGAACATGAATGGAATCA
ACGCGTTGACATGTTGCAATTTCAAGTGGAAGAAATTAAGTCTGCCAATTTAATGGCTGGTGAAGATGAGGAACTTGAAA
AAAGACGGGATCAATTAAACAACTTTCAAAGTATTTCCGACGCTCTTTCAACAAGTTTTCAACTTTTGGAAGGTGAAGAT
GGGGCCTCTGCGATTGATCAAATTGGTAGCGTAATGCAAGAATTACAAAGTATTTCTGATTATGATGATGAGTACCAACA
AGTTTCTGATGAGGTACAAAGTGCCTATTATGCTTTAGAAGATGTAACTAATCGAGTCCGTTCTGCGCTTGATGCGATGG
AATGGAATTCAAATGAATTAGACGAAGTTGAACAAAGGTTAGAAGTAGTTCGTCAGCTAAAGAAAAAATATGGTAATTCA
ATTGAAGAAATTCTTAACTATTTGAATAAAATTGAGAATGAACTCAATGAAATGACTGGTTCAGGAAACAATTTGGATGA
TCTTGCACAGGAAGTTGAAGCGAGGTATCAAAGAGTTAAAAAATTAGGAACTCAACTCACGGAAATGCGTCAAAGAATGG
CCTTAGCATTAGAAGCAGCTATACGTGAACAATTGTCAGGTCTTTACATGGAAAAAACACAATTTAAAGTGCAATTTACT
CCTAAAGCTGAACCAGATCGAACCGGATTTGATGGGGTAGAATTTTTGATTCAACCTAATCCTGGTGAAGATTTGAAACC
TTTAGCAAAAATAGCGTCTGGCGGAGAGCTCTCACGAATAATGTTAGCGTTGAAAACTATTTTTGCGCGTAACGAAGGGG
TTACTAGTATTATTTTTGATGAAGTTGATACCGGAGTAAGCGGCCGTGTAGCACAAGCAATTGCAGATAAGATTCATGAA
ATTTCGGCCCATTCACAAGTATTGTGTATTTCCCACTTACCACAAGTTGCAGCTAGAGCAGATCATCAGTTGCATGTGGC
CAAGAAAGTGGTCGATGGACGTACAATGACGAATTTAACAGTGCTGAATGACGAAGGACGGGTTAATGAAATCGCCAAAA
TGTTAGCCGGGGTTAATATCACGGAATTAAGCTTAGAACATGCTCGTGAATTATTAAAAACGGAACAAGCCCACTAA

Upstream 100 bases:

>100_bases
ATGACAATGGAGTGCTAGTTATTTGTACTGATGATGAACATGCAGTCCGATTAAAGGATCGGATTACACAATCAATTGCT
TACATCTAGGAGAATTAGAT

Downstream 100 bases:

>100_bases
AAAACTCTCACTAGCAAATTGAAAGATAACCTTGATTCTTAGGGATATTTTCGGTTTAATAGTGAGAGTTTTTAAATTAA
GGCGATGCTTCGAATTTGTT

Product: DNA repair ATPase

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MLLELSIKDFAIIEKLDVSFNQGMTVLTGETGAGKSIIIDAVGLLAGGRGSADFVRTGADKAVLQGVFDIAEIDNTKNAL
IKLGIDATNDLVITRELHKGGRSVCRINGTIVNLNSLKSVGETLIDIHGQNEHQELMNSEKHLALLDHFDEKMVGKVRAK
YEEAYADYSKLNQQLNKSRKNEHEWNQRVDMLQFQVEEIKSANLMAGEDEELEKRRDQLNNFQSISDALSTSFQLLEGED
GASAIDQIGSVMQELQSISDYDDEYQQVSDEVQSAYYALEDVTNRVRSALDAMEWNSNELDEVEQRLEVVRQLKKKYGNS
IEEILNYLNKIENELNEMTGSGNNLDDLAQEVEARYQRVKKLGTQLTEMRQRMALALEAAIREQLSGLYMEKTQFKVQFT
PKAEPDRTGFDGVEFLIQPNPGEDLKPLAKIASGGELSRIMLALKTIFARNEGVTSIIFDEVDTGVSGRVAQAIADKIHE
ISAHSQVLCISHLPQVAARADHQLHVAKKVVDGRTMTNLTVLNDEGRVNEIAKMLAGVNITELSLEHARELLKTEQAH

Sequences:

>Translated_558_residues
MLLELSIKDFAIIEKLDVSFNQGMTVLTGETGAGKSIIIDAVGLLAGGRGSADFVRTGADKAVLQGVFDIAEIDNTKNAL
IKLGIDATNDLVITRELHKGGRSVCRINGTIVNLNSLKSVGETLIDIHGQNEHQELMNSEKHLALLDHFDEKMVGKVRAK
YEEAYADYSKLNQQLNKSRKNEHEWNQRVDMLQFQVEEIKSANLMAGEDEELEKRRDQLNNFQSISDALSTSFQLLEGED
GASAIDQIGSVMQELQSISDYDDEYQQVSDEVQSAYYALEDVTNRVRSALDAMEWNSNELDEVEQRLEVVRQLKKKYGNS
IEEILNYLNKIENELNEMTGSGNNLDDLAQEVEARYQRVKKLGTQLTEMRQRMALALEAAIREQLSGLYMEKTQFKVQFT
PKAEPDRTGFDGVEFLIQPNPGEDLKPLAKIASGGELSRIMLALKTIFARNEGVTSIIFDEVDTGVSGRVAQAIADKIHE
ISAHSQVLCISHLPQVAARADHQLHVAKKVVDGRTMTNLTVLNDEGRVNEIAKMLAGVNITELSLEHARELLKTEQAH
>Mature_558_residues
MLLELSIKDFAIIEKLDVSFNQGMTVLTGETGAGKSIIIDAVGLLAGGRGSADFVRTGADKAVLQGVFDIAEIDNTKNAL
IKLGIDATNDLVITRELHKGGRSVCRINGTIVNLNSLKSVGETLIDIHGQNEHQELMNSEKHLALLDHFDEKMVGKVRAK
YEEAYADYSKLNQQLNKSRKNEHEWNQRVDMLQFQVEEIKSANLMAGEDEELEKRRDQLNNFQSISDALSTSFQLLEGED
GASAIDQIGSVMQELQSISDYDDEYQQVSDEVQSAYYALEDVTNRVRSALDAMEWNSNELDEVEQRLEVVRQLKKKYGNS
IEEILNYLNKIENELNEMTGSGNNLDDLAQEVEARYQRVKKLGTQLTEMRQRMALALEAAIREQLSGLYMEKTQFKVQFT
PKAEPDRTGFDGVEFLIQPNPGEDLKPLAKIASGGELSRIMLALKTIFARNEGVTSIIFDEVDTGVSGRVAQAIADKIHE
ISAHSQVLCISHLPQVAARADHQLHVAKKVVDGRTMTNLTVLNDEGRVNEIAKMLAGVNITELSLEHARELLKTEQAH

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=561, Percent_Identity=33.6898395721925, Blast_Score=300, Evalue=2e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62213; Mature: 62213

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLELSIKDFAIIEKLDVSFNQGMTVLTGETGAGKSIIIDAVGLLAGGRGSADFVRTGAD
CEEEECCHHHHHHHHHCCHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCH
KAVLQGVFDIAEIDNTKNALIKLGIDATNDLVITRELHKGGRSVCRINGTIVNLNSLKSV
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEHHHHHCCCCEEEECCEEEEHHHHHHH
GETLIDIHGQNEHQELMNSEKHLALLDHFDEKMVGKVRAKYEEAYADYSKLNQQLNKSRK
HHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NEHEWNQRVDMLQFQVEEIKSANLMAGEDEELEKRRDQLNNFQSISDALSTSFQLLEGED
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GASAIDQIGSVMQELQSISDYDDEYQQVSDEVQSAYYALEDVTNRVRSALDAMEWNSNEL
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
DEVEQRLEVVRQLKKKYGNSIEEILNYLNKIENELNEMTGSGNNLDDLAQEVEARYQRVK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KLGTQLTEMRQRMALALEAAIREQLSGLYMEKTQFKVQFTPKAEPDRTGFDGVEFLIQPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEEEEECCCCCCCCCCCCCEEEEECCC
PGEDLKPLAKIASGGELSRIMLALKTIFARNEGVTSIIFDEVDTGVSGRVAQAIADKIHE
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
ISAHSQVLCISHLPQVAARADHQLHVAKKVVDGRTMTNLTVLNDEGRVNEIAKMLAGVNI
HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCH
TELSLEHARELLKTEQAH
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLLELSIKDFAIIEKLDVSFNQGMTVLTGETGAGKSIIIDAVGLLAGGRGSADFVRTGAD
CEEEECCHHHHHHHHHCCHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCH
KAVLQGVFDIAEIDNTKNALIKLGIDATNDLVITRELHKGGRSVCRINGTIVNLNSLKSV
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEHHHHHCCCCEEEECCEEEEHHHHHHH
GETLIDIHGQNEHQELMNSEKHLALLDHFDEKMVGKVRAKYEEAYADYSKLNQQLNKSRK
HHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NEHEWNQRVDMLQFQVEEIKSANLMAGEDEELEKRRDQLNNFQSISDALSTSFQLLEGED
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GASAIDQIGSVMQELQSISDYDDEYQQVSDEVQSAYYALEDVTNRVRSALDAMEWNSNEL
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
DEVEQRLEVVRQLKKKYGNSIEEILNYLNKIENELNEMTGSGNNLDDLAQEVEARYQRVK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KLGTQLTEMRQRMALALEAAIREQLSGLYMEKTQFKVQFTPKAEPDRTGFDGVEFLIQPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEEEEECCCCCCCCCCCCCEEEEECCC
PGEDLKPLAKIASGGELSRIMLALKTIFARNEGVTSIIFDEVDTGVSGRVAQAIADKIHE
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
ISAHSQVLCISHLPQVAARADHQLHVAKKVVDGRTMTNLTVLNDEGRVNEIAKMLAGVNI
HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCH
TELSLEHARELLKTEQAH
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]