| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is argR2 [H]
Identifier: 116492589
GI number: 116492589
Start: 827405
End: 827863
Strand: Direct
Name: argR2 [H]
Synonym: PEPE_0822
Alternate gene names: 116492589
Gene position: 827405-827863 (Clockwise)
Preceding gene: 116492588
Following gene: 116492590
Centisome position: 45.15
GC content: 37.47
Gene sequence:
>459_bases ATGCGAAAAAACGACCGACATGAACTAATTAAACAAATTATCAACGAAAATGAAATTGATCGTCAAGAAGATATCGTACT TCACTTGCAGGAGCAGGGCGTTGAAGTGACGCAGGCGACCGTTTCAAGGGATATTCGTGAATTAAAATTAATTAAATCAC CCACTAAAAAAGGTGGAGTACGATATTCTCTCCCTAAAGGGGATACTTCCCAAATTGAACAACGACTTTTTACGTTATTA AGTTCGGCTTTGATTTCAATTAAAGTTCAGGAAAAGTTTGTGTTTATTGATTTAAAGCCAGGAAACGGAGCTAGTATTTC AGCAACGCTAAAACAGGTCCACTATGGGTTTGTTTTTGCAGCAGTTAGTGATGACAATGGAGTGCTAGTTATTTGTACTG ATGATGAACATGCAGTCCGATTAAAGGATCGGATTACACAATCAATTGCTTACATCTAG
Upstream 100 bases:
>100_bases TTGAACGATCCGATACGGATCAAGGAGTGATTGAAGAGAATGTTGATACCCAAAAAGTGATTGATAGTGCATATTCCAAC TTAAATTCATAGGTGAAACA
Downstream 100 bases:
>100_bases GAGAATTAGATATGTTATTGGAATTATCTATAAAGGATTTCGCAATTATCGAGAAGCTTGATGTTAGTTTCAACCAAGGA ATGACTGTTCTGACGGGAGA
Product: ArgR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MRKNDRHELIKQIINENEIDRQEDIVLHLQEQGVEVTQATVSRDIRELKLIKSPTKKGGVRYSLPKGDTSQIEQRLFTLL SSALISIKVQEKFVFIDLKPGNGASISATLKQVHYGFVFAAVSDDNGVLVICTDDEHAVRLKDRITQSIAYI
Sequences:
>Translated_152_residues MRKNDRHELIKQIINENEIDRQEDIVLHLQEQGVEVTQATVSRDIRELKLIKSPTKKGGVRYSLPKGDTSQIEQRLFTLL SSALISIKVQEKFVFIDLKPGNGASISATLKQVHYGFVFAAVSDDNGVLVICTDDEHAVRLKDRITQSIAYI >Mature_152_residues MRKNDRHELIKQIINENEIDRQEDIVLHLQEQGVEVTQATVSRDIRELKLIKSPTKKGGVRYSLPKGDTSQIEQRLFTLL SSALISIKVQEKFVFIDLKPGNGASISATLKQVHYGFVFAAVSDDNGVLVICTDDEHAVRLKDRITQSIAYI
Specific function: Regulates arginine biosynthesis genes [H]
COG id: COG1438
COG function: function code K; Arginine repressor
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001669 - InterPro: IPR020899 - InterPro: IPR020900 - InterPro: IPR011991 - ProDom: PD007402 [H]
Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C [H]
EC number: NA
Molecular weight: Translated: 17146; Mature: 17146
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKNDRHELIKQIINENEIDRQEDIVLHLQEQGVEVTQATVSRDIRELKLIKSPTKKGGV CCCCHHHHHHHHHHCCCCCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCE RYSLPKGDTSQIEQRLFTLLSSALISIKVQEKFVFIDLKPGNGASISATLKQVHYGFVFA EEECCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCHHHHHHHHHEEEEEE AVSDDNGVLVICTDDEHAVRLKDRITQSIAYI EEECCCCEEEEEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRKNDRHELIKQIINENEIDRQEDIVLHLQEQGVEVTQATVSRDIRELKLIKSPTKKGGV CCCCHHHHHHHHHHCCCCCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCE RYSLPKGDTSQIEQRLFTLLSSALISIKVQEKFVFIDLKPGNGASISATLKQVHYGFVFA EEECCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCHHHHHHHHHEEEEEE AVSDDNGVLVICTDDEHAVRLKDRITQSIAYI EEECCCCEEEEEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12566566 [H]