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The map label for this gene is 116492431

Identifier: 116492431

GI number: 116492431

Start: 701847

End: 702554

Strand: Direct

Name: 116492431

Synonym: PEPE_0662

Alternate gene names: NA

Gene position: 701847-702554 (Clockwise)

Preceding gene: 116492430

Following gene: 116492432

Centisome position: 38.3

GC content: 36.58

Gene sequence:

>708_bases
GTGAAAAAATTCTTTACGATTATTGGTGGAATGGGGACTCCAGCAACTGAAAGTTACATTAGGTTATTAAATGCTAGAAC
TCCTACCCATCGCGATCAAGATTATTTAAATTACATTTTAGTAAACCATGCTACAGTTCCGGATCGTTCAACCTATTTAA
TGGACCATTCGCAACCAAACCCTTACCCAGATTTATTAGAGGACATTCAAGAACAAAGCAAGCTGAATCCAGCCTTTTTT
GTAATTGCCTGTAATACTGCACACTTTTTCTATGATGATTTGCAAAAAGCAACGGATGTGCCCATTGTGCATATGCCCCG
CGAAACTGTAAAACATATCAAAGAGCAGTATCCAAATGCTAAAAAAATCGGGATTATTGGGACACCTGGAACGACTAGTG
ATGGAATTTATGACCGTGAATTGTTAGCTGAAGGTTTTGAAGTTGTTAAACCAACTAAAGCAATTCAGGATTTAACTAGC
AAGTTAATTTTTGATGATATCAAAGAACAAAATCTAGTCGATGCTGAGCTTTTCTATCATATTCTAAAAATGATGGTAGA
AGAACAAGGAGCCGATGTGGTAATTTTAGGTTGTACTGAATTATCGTATGCTCAGGAAATGGCTCATGATCACAGTTTTC
CGGTTGCAGATTCACAATCGGTATTAGTAGATAAATCGATCGAAATGGCTTTGAAACTAAGAAAGTAA

Upstream 100 bases:

>100_bases
AGGATATGAACTTTAAGCGTAGCTTATTAATGTGGTGGATGAACCATAATTATGTTAAGAACTTTAGGAAGTATTTTAAG
GAAAATAAGGGGTAAGACCT

Downstream 100 bases:

>100_bases
AAATAAAAGTTGGGATTAAACTAAACCAGTTTGTCCCAACTTTTTACTATGATTAACTTGGAGGAAGAGATGAGTAAACG
AAGAAGAAAAAATAAGCAGT

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKKFFTIIGGMGTPATESYIRLLNARTPTHRDQDYLNYILVNHATVPDRSTYLMDHSQPNPYPDLLEDIQEQSKLNPAFF
VIACNTAHFFYDDLQKATDVPIVHMPRETVKHIKEQYPNAKKIGIIGTPGTTSDGIYDRELLAEGFEVVKPTKAIQDLTS
KLIFDDIKEQNLVDAELFYHILKMMVEEQGADVVILGCTELSYAQEMAHDHSFPVADSQSVLVDKSIEMALKLRK

Sequences:

>Translated_235_residues
MKKFFTIIGGMGTPATESYIRLLNARTPTHRDQDYLNYILVNHATVPDRSTYLMDHSQPNPYPDLLEDIQEQSKLNPAFF
VIACNTAHFFYDDLQKATDVPIVHMPRETVKHIKEQYPNAKKIGIIGTPGTTSDGIYDRELLAEGFEVVKPTKAIQDLTS
KLIFDDIKEQNLVDAELFYHILKMMVEEQGADVVILGCTELSYAQEMAHDHSFPVADSQSVLVDKSIEMALKLRK
>Mature_235_residues
MKKFFTIIGGMGTPATESYIRLLNARTPTHRDQDYLNYILVNHATVPDRSTYLMDHSQPNPYPDLLEDIQEQSKLNPAFF
VIACNTAHFFYDDLQKATDVPIVHMPRETVKHIKEQYPNAKKIGIIGTPGTTSDGIYDRELLAEGFEVVKPTKAIQDLTS
KLIFDDIKEQNLVDAELFYHILKMMVEEQGADVVILGCTELSYAQEMAHDHSFPVADSQSVLVDKSIEMALKLRK

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.13 [H]

Molecular weight: Translated: 26648; Mature: 26648

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00923 ASP_GLU_RACEMASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFFTIIGGMGTPATESYIRLLNARTPTHRDQDYLNYILVNHATVPDRSTYLMDHSQPN
CCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHEEEEECCCCCCCCEEEEECCCCC
PYPDLLEDIQEQSKLNPAFFVIACNTAHFFYDDLQKATDVPIVHMPRETVKHIKEQYPNA
CCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCC
KKIGIIGTPGTTSDGIYDRELLAEGFEVVKPTKAIQDLTSKLIFDDIKEQNLVDAELFYH
CEEEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ILKMMVEEQGADVVILGCTELSYAQEMAHDHSFPVADSQSVLVDKSIEMALKLRK
HHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHEECC
>Mature Secondary Structure
MKKFFTIIGGMGTPATESYIRLLNARTPTHRDQDYLNYILVNHATVPDRSTYLMDHSQPN
CCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHEEEEECCCCCCCCEEEEECCCCC
PYPDLLEDIQEQSKLNPAFFVIACNTAHFFYDDLQKATDVPIVHMPRETVKHIKEQYPNA
CCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCC
KKIGIIGTPGTTSDGIYDRELLAEGFEVVKPTKAIQDLTSKLIFDDIKEQNLVDAELFYH
CEEEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ILKMMVEEQGADVVILGCTELSYAQEMAHDHSFPVADSQSVLVDKSIEMALKLRK
HHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2054383; 1907199 [H]