Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492430

Identifier: 116492430

GI number: 116492430

Start: 700585

End: 701841

Strand: Direct

Name: 116492430

Synonym: PEPE_0661

Alternate gene names: NA

Gene position: 700585-701841 (Clockwise)

Preceding gene: 116492429

Following gene: 116492431

Centisome position: 38.23

GC content: 34.92

Gene sequence:

>1257_bases
ATGGAAAGACCAACTAACAATTTTACGCCAATTCTATTAGGTAGTGATTTTAATGCTTATGGGATGGCTCGTTCATTTTA
CGAAATTACAGGAAGACGTGTTCAAGCGTATGCCGGGACCGTGCTAGCACCCACACGTTTTACTAAAATCGTGAATGTTG
ATATTATTCCTGGTTTTTCAGAAGACCCTGTTTTTATTGAATCAATGCGTAAAATTGCTAAAAAATACGAAAATTCTGAC
GAGAAGGTTGTTTTACTAGGGATGGGCGATGGCTATGCTGAATTGATTTCAAAGCATAAAGAAGAGTTGTCAAAAACTTT
CATCTGTCCCTACATCGATTATGATTTATTGAAACAATTGAATAATAAAGAACGTTTTTATTCAATTTGTGATGAATATA
ATTTACCATATCCAGCAACCCATTTTATTACGAAGGCACAATATGAAAGTGGTGAGAAATTCATCTCACCTTTTGAATTT
CCAGTTGCTTTGAAGCCAGCTGACAGTGTAGAATGGCTCGATATTCATTTTGAAGGTCGTAAAAAAGCTTTCAGAATTAA
AACTCAAGCAGAACTTGATGAAGTCATTGGTAAAATCTATGACAATGGCTATACTTCTGATTTGATTTTACAAGATTTTA
TTCCAGGTGATGATAGCAACATGCGAGTTTTGAATGCTTATGTTGATCAAAATCATCAAGTAAAAATGATGTGTTTAGGT
CATCCATTATTGGAGGATCCAGCTCCATCAGCAATTGGAAACTACGTAGCAATTATTCCTGAATTTAACCAAGAAATTTA
TGACACGGTTAAAAACTTTCTTGAAAGTATCAATTACGTTGGATATGCCAACTTTGATATGAAATATGACAGTCGGGATG
GTAAGTTTAAATTATTTGAAATCAATATTCGTCAAGGCCGTAGTAGCTTCTTTGTTACATTAAATGGATACAACCTAGCT
CGTTGGGTGGTTGAAGACCGAGTTAACAATGCGTTGGCTGATCGTGAAACTGTATACGCTAATGATGTTCCAGGCAACTG
GAAGTTATGGTTGGGCGTTCCAGTTAAGGTCTTCAAAAAGTATGCTAAAAATAATGATGATAAGCAAAAGGCGCTTGAAC
TAATTAACAATGATCAATATGGATTTACCGCTATCTACGATGAGGATATGAACTTTAAGCGTAGCTTATTAATGTGGTGG
ATGAACCATAATTATGTTAAGAACTTTAGGAAGTATTTTAAGGAAAATAAGGGGTAA

Upstream 100 bases:

>100_bases
CCGGAAAAGGTGAAGATCCATACCAAAAAGTTGGAGGGGTAGATACTCCTTGGCCAACTGATATGGGAGTAGCAGAAGAA
GTGAAGAGGGGATTAAGTTA

Downstream 100 bases:

>100_bases
GACCTGTGAAAAAATTCTTTACGATTATTGGTGGAATGGGGACTCCAGCAACTGAAAGTTACATTAGGTTATTAAATGCT
AGAACTCCTACCCATCGCGA

Product: ATP-grasp protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MERPTNNFTPILLGSDFNAYGMARSFYEITGRRVQAYAGTVLAPTRFTKIVNVDIIPGFSEDPVFIESMRKIAKKYENSD
EKVVLLGMGDGYAELISKHKEELSKTFICPYIDYDLLKQLNNKERFYSICDEYNLPYPATHFITKAQYESGEKFISPFEF
PVALKPADSVEWLDIHFEGRKKAFRIKTQAELDEVIGKIYDNGYTSDLILQDFIPGDDSNMRVLNAYVDQNHQVKMMCLG
HPLLEDPAPSAIGNYVAIIPEFNQEIYDTVKNFLESINYVGYANFDMKYDSRDGKFKLFEINIRQGRSSFFVTLNGYNLA
RWVVEDRVNNALADRETVYANDVPGNWKLWLGVPVKVFKKYAKNNDDKQKALELINNDQYGFTAIYDEDMNFKRSLLMWW
MNHNYVKNFRKYFKENKG

Sequences:

>Translated_418_residues
MERPTNNFTPILLGSDFNAYGMARSFYEITGRRVQAYAGTVLAPTRFTKIVNVDIIPGFSEDPVFIESMRKIAKKYENSD
EKVVLLGMGDGYAELISKHKEELSKTFICPYIDYDLLKQLNNKERFYSICDEYNLPYPATHFITKAQYESGEKFISPFEF
PVALKPADSVEWLDIHFEGRKKAFRIKTQAELDEVIGKIYDNGYTSDLILQDFIPGDDSNMRVLNAYVDQNHQVKMMCLG
HPLLEDPAPSAIGNYVAIIPEFNQEIYDTVKNFLESINYVGYANFDMKYDSRDGKFKLFEINIRQGRSSFFVTLNGYNLA
RWVVEDRVNNALADRETVYANDVPGNWKLWLGVPVKVFKKYAKNNDDKQKALELINNDQYGFTAIYDEDMNFKRSLLMWW
MNHNYVKNFRKYFKENKG
>Mature_418_residues
MERPTNNFTPILLGSDFNAYGMARSFYEITGRRVQAYAGTVLAPTRFTKIVNVDIIPGFSEDPVFIESMRKIAKKYENSD
EKVVLLGMGDGYAELISKHKEELSKTFICPYIDYDLLKQLNNKERFYSICDEYNLPYPATHFITKAQYESGEKFISPFEF
PVALKPADSVEWLDIHFEGRKKAFRIKTQAELDEVIGKIYDNGYTSDLILQDFIPGDDSNMRVLNAYVDQNHQVKMMCLG
HPLLEDPAPSAIGNYVAIIPEFNQEIYDTVKNFLESINYVGYANFDMKYDSRDGKFKLFEINIRQGRSSFFVTLNGYNLA
RWVVEDRVNNALADRETVYANDVPGNWKLWLGVPVKVFKKYAKNNDDKQKALELINNDQYGFTAIYDEDMNFKRSLLMWW
MNHNYVKNFRKYFKENKG

Specific function: Unknown

COG id: COG3919

COG function: function code R; Predicted ATP-grasp enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48602; Mature: 48602

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERPTNNFTPILLGSDFNAYGMARSFYEITGRRVQAYAGTVLAPTRFTKIVNVDIIPGFS
CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCCEECCCCEEEEEEEEEECCCC
EDPVFIESMRKIAKKYENSDEKVVLLGMGDGYAELISKHKEELSKTFICPYIDYDLLKQL
CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHC
NNKERFYSICDEYNLPYPATHFITKAQYESGEKFISPFEFPVALKPADSVEWLDIHFEGR
CCHHHHHHHHHCCCCCCCHHHHEEEHHHCCCCHHCCCCCCCEEECCCCCCEEEEEEECCC
KKAFRIKTQAELDEVIGKIYDNGYTSDLILQDFIPGDDSNMRVLNAYVDQNHQVKMMCLG
CEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEC
HPLLEDPAPSAIGNYVAIIPEFNQEIYDTVKNFLESINYVGYANFDMKYDSRDGKFKLFE
CCCCCCCCCCHHCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEE
INIRQGRSSFFVTLNGYNLARWVVEDRVNNALADRETVYANDVPGNWKLWLGVPVKVFKK
EEEECCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCHHHHHH
YAKNNDDKQKALELINNDQYGFTAIYDEDMNFKRSLLMWWMNHNYVKNFRKYFKENKG
HHCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MERPTNNFTPILLGSDFNAYGMARSFYEITGRRVQAYAGTVLAPTRFTKIVNVDIIPGFS
CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCCEECCCCEEEEEEEEEECCCC
EDPVFIESMRKIAKKYENSDEKVVLLGMGDGYAELISKHKEELSKTFICPYIDYDLLKQL
CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHC
NNKERFYSICDEYNLPYPATHFITKAQYESGEKFISPFEFPVALKPADSVEWLDIHFEGR
CCHHHHHHHHHCCCCCCCHHHHEEEHHHCCCCHHCCCCCCCEEECCCCCCEEEEEEECCC
KKAFRIKTQAELDEVIGKIYDNGYTSDLILQDFIPGDDSNMRVLNAYVDQNHQVKMMCLG
CEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEC
HPLLEDPAPSAIGNYVAIIPEFNQEIYDTVKNFLESINYVGYANFDMKYDSRDGKFKLFE
CCCCCCCCCCHHCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEE
INIRQGRSSFFVTLNGYNLARWVVEDRVNNALADRETVYANDVPGNWKLWLGVPVKVFKK
EEEECCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCHHHHHH
YAKNNDDKQKALELINNDQYGFTAIYDEDMNFKRSLLMWWMNHNYVKNFRKYFKENKG
HHCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA