| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492320
Identifier: 116492320
GI number: 116492320
Start: 578507
End: 578764
Strand: Reverse
Name: 116492320
Synonym: PEPE_0522
Alternate gene names: NA
Gene position: 578764-578507 (Counterclockwise)
Preceding gene: 116492327
Following gene: 116492316
Centisome position: 31.59
GC content: 48.84
Gene sequence:
>258_bases ATGGCCAAATTTGATGCGACCATCGCTTCATTCGCCCGTCACTTGCCAGCCAACAGTAAATCAATTCGTTTCCAAGCAAT CCAACCGACCGAAGTGATTTCTGATCAAGCCGCCTTACAATTACTATTCAAGTTGCTAGATACTGGTCAATTGGTCACGA CGATCGATGAACAACTACCGTTTAACCTCACGGGCTTCATTCAAGGTCACCAACGACTAGATGAGCCTCACGTGGGCCAA GTGGTCGCCGCGCGCTAA
Upstream 100 bases:
>100_bases AAAAGTTGTCTCAGGAATCAGCTTACATCCAGACCCAGACCGCGGTGACGTCGTAATCAATGTCGCTATCGATGGCGTTG GTAGCAAAGATGACTTAGCA
Downstream 100 bases:
>100_bases AAAAACTGCTTTCAAAAGTTATCCTTTTGAAAGCAGTTTTTTTAGTCAGGTGGTCGCTTATTAAGACCATCGCAGAATTT TGAACAACCCAATTCACACT
Product: NADPH:quinone reductase related Zn-dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MAKFDATIASFARHLPANSKSIRFQAIQPTEVISDQAALQLLFKLLDTGQLVTTIDEQLPFNLTGFIQGHQRLDEPHVGQ VVAAR
Sequences:
>Translated_85_residues MAKFDATIASFARHLPANSKSIRFQAIQPTEVISDQAALQLLFKLLDTGQLVTTIDEQLPFNLTGFIQGHQRLDEPHVGQ VVAAR >Mature_84_residues AKFDATIASFARHLPANSKSIRFQAIQPTEVISDQAALQLLFKLLDTGQLVTTIDEQLPFNLTGFIQGHQRLDEPHVGQV VAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9386; Mature: 9255
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFDATIASFARHLPANSKSIRFQAIQPTEVISDQAALQLLFKLLDTGQLVTTIDEQLP CCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCC FNLTGFIQGHQRLDEPHVGQVVAAR CCCHHEECCHHHCCCCCCCCEEECC >Mature Secondary Structure AKFDATIASFARHLPANSKSIRFQAIQPTEVISDQAALQLLFKLLDTGQLVTTIDEQLP CCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCC FNLTGFIQGHQRLDEPHVGQVVAAR CCCHHEECCHHHCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA