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The map label for this gene is scrA [H]

Identifier: 116492316

GI number: 116492316

Start: 571975

End: 573930

Strand: Reverse

Name: scrA [H]

Synonym: PEPE_0518

Alternate gene names: 116492316

Gene position: 573930-571975 (Counterclockwise)

Preceding gene: 116492320

Following gene: 116492315

Centisome position: 31.32

GC content: 46.57

Gene sequence:

>1956_bases
ATGAATCATCAAGAAGTTGCCGACCGCGTACTTAATGCAATTGGTAAAAACAACATTCAAGCCGCCGCCCACTGTGCGAC
ACGCCTCCGTTTGGTCATCAAGGATGAATCCAAGATTGATCAACAAGCCTTAGATGACGACGCGGACGTTAAGGGGACCT
TCGAAACTAACGGCCAGTACCAAATCATTATTGGCCCTGGCGATGTCGATAAAGTCTATGACGCCTTAATCGCCAAAACA
GGTCTTAAAGAAGTGACACCCGATGACATCAAGGCAGTTGCCGCTGCGGGTCAAAAGAAAAATCCATTAATGGACTTCCT
CAAAGTCTTATCTGATATTTTTATTCCAATCGTCCCTGCACTAGTTGCTGGGGGTCTATTAATGGCACTAAACAACGTTT
TGACTGCCGAGCATCTTTTTATGGCGAAGTCAGTTGTTGAAGTTTACCCTGGCCTCAAAGGTATCGCCGAAATGATTAAC
GCGATGGCTAGTGCGCCGTTTACTTTCTTGCCAATCCTCTTAGGATTTTCAGCAACGAAGCGCTTCGGTGGCAACCCCTA
TCTGGGTGCTACGATGGGCATGATCATGGTCTTACCATCACTAGTTAACGGCTATAGCGTTGCAACGACCATGGCAGCCG
GCAAGATGGTTTACTGGAACGTCTTTGGGTTACACGTTGCACAAGCCGGCTATCAAGGCCAAGTGCTCCCAGTCTTAGGC
GTCGCCTTCATTCTAGCTACCCTTGAAAAATTCTTCCATAAACACATTAAAGGGGCATTTGACTTCACGTTTACCCCGAT
GTTTGCCATTGTGATTACTGGTTTCCTAACTTTTACAATCGTTGGTCCCGTCTTACGAACGGTGAGCGATGCATTAACTA
ACGGTTTAGTAGGCTTATATAACAGCACCGGCTGGATTGGTATGGGAATCTTTGGTTTATTATATTCTGCAATTGTTATT
ACTGGTCTCCATCAAACTTTCCCAGCAATCGAAACCCAGTTGTTGGCCAATGTTGCCAAAACTGGTGGTTCCTTTATCTT
CCCAGTCGCCTCGATGGCCAACATTGGGCAAGGTGCCGCCACTTTAGCTATTTTCTTTGCCACTAAGAGCCAAAAGCAAA
AAGCCCTGACTTCTTCAGCCGGGGTCTCAGCGTTACTCGGAATTACGGAACCTGCTATTTTCGGGGTCAACCTCAAGATG
AAATTTCCATTTGTCTTTGCAGCGATTGCCTCAGGAATTGCTTCAGCTTTCTTAGGACTATTCCACGTTCTGTCCGTGGC
GATGGGTCCCGCATCAGTCATCGGATTCATTTCGATTGCTTCAAAGTCGATTCCAGCATTCATGCTCAGTGCTGTCATCT
CGTTCGTCGTCGCATTTATTCCAACTTTTATCTATGCCAAACGAACACTCGGTGACGATCGTGATCAAGTAAAATCACCA
GCACCAACGAGTACCGTCATCAATGTTAATGATGAGATTATCAGTGCACCGGTAACGGGGGCTAGCAAAAGTCTCAAACA
AGTTAACGACCAAGTTTTCTCAGCCGAAATCATGGGGAAAGGCGCCGCAATCGTGCCAAGCGCTGATCAGGTCGTCGCAC
CAGCTGACGGGGTCATCACTGTCACTTATGATAGCCATCATGCTTATGGCATCAAAACAACTGCTGGTGCCGAAATTCTG
ATTCACTTAGGATTAGATACGGTCAATTTAAATGGTGAACACTTCACTACTAACGTTCAGAAGGGCGATACCGTTCATCA
AGGTGATCTACTCGGAACGTTTGACATCGCTGCCTTAAAAGCCGCTAACTATGATCCAACCGTCATGCTAATCGTCACAA
ATACGGCCAATTACGCTAATGTTGAACGACTCAAAGTCACGAATGTCCAAGCTGGTGAACAGCTCGTTGCGTTGACTGCA
CCGGCAGCTAGCTCAGTTGCTGCTACAACTGTCTAA

Upstream 100 bases:

>100_bases
TCAAACGCTTGACATATTTTCCAAAATTGCTATTATTGGGTCTGTAAAGCGCTTGCATTATTAAATTAAAAATAATTTTA
GACTCAGGGAGTGAATTATT

Downstream 100 bases:

>100_bases
ACTTTATTAGGAGGACGTCATGCCTGTTGAATATGACCCCAAAACCGGCTTAATCAATCTTCATAATGACCAAATTAGCT
ATGTTATTCAAATTTTAGCT

Product: sucrose PTS, EIIBCA

Products: NA

Alternate protein names: EIIBCA-Scr; EII-Scr; Sucrose-specific phosphotransferase enzyme IIB component; PTS system sucrose-specific EIIB component; Sucrose permease IIC component; PTS system sucrose-specific EIIC component; Sucrose-specific phosphotransferase enzyme IIA component; PTS system sucrose-specific EIIA component [H]

Number of amino acids: Translated: 651; Mature: 651

Protein sequence:

>651_residues
MNHQEVADRVLNAIGKNNIQAAAHCATRLRLVIKDESKIDQQALDDDADVKGTFETNGQYQIIIGPGDVDKVYDALIAKT
GLKEVTPDDIKAVAAAGQKKNPLMDFLKVLSDIFIPIVPALVAGGLLMALNNVLTAEHLFMAKSVVEVYPGLKGIAEMIN
AMASAPFTFLPILLGFSATKRFGGNPYLGATMGMIMVLPSLVNGYSVATTMAAGKMVYWNVFGLHVAQAGYQGQVLPVLG
VAFILATLEKFFHKHIKGAFDFTFTPMFAIVITGFLTFTIVGPVLRTVSDALTNGLVGLYNSTGWIGMGIFGLLYSAIVI
TGLHQTFPAIETQLLANVAKTGGSFIFPVASMANIGQGAATLAIFFATKSQKQKALTSSAGVSALLGITEPAIFGVNLKM
KFPFVFAAIASGIASAFLGLFHVLSVAMGPASVIGFISIASKSIPAFMLSAVISFVVAFIPTFIYAKRTLGDDRDQVKSP
APTSTVINVNDEIISAPVTGASKSLKQVNDQVFSAEIMGKGAAIVPSADQVVAPADGVITVTYDSHHAYGIKTTAGAEIL
IHLGLDTVNLNGEHFTTNVQKGDTVHQGDLLGTFDIAALKAANYDPTVMLIVTNTANYANVERLKVTNVQAGEQLVALTA
PAASSVAATTV

Sequences:

>Translated_651_residues
MNHQEVADRVLNAIGKNNIQAAAHCATRLRLVIKDESKIDQQALDDDADVKGTFETNGQYQIIIGPGDVDKVYDALIAKT
GLKEVTPDDIKAVAAAGQKKNPLMDFLKVLSDIFIPIVPALVAGGLLMALNNVLTAEHLFMAKSVVEVYPGLKGIAEMIN
AMASAPFTFLPILLGFSATKRFGGNPYLGATMGMIMVLPSLVNGYSVATTMAAGKMVYWNVFGLHVAQAGYQGQVLPVLG
VAFILATLEKFFHKHIKGAFDFTFTPMFAIVITGFLTFTIVGPVLRTVSDALTNGLVGLYNSTGWIGMGIFGLLYSAIVI
TGLHQTFPAIETQLLANVAKTGGSFIFPVASMANIGQGAATLAIFFATKSQKQKALTSSAGVSALLGITEPAIFGVNLKM
KFPFVFAAIASGIASAFLGLFHVLSVAMGPASVIGFISIASKSIPAFMLSAVISFVVAFIPTFIYAKRTLGDDRDQVKSP
APTSTVINVNDEIISAPVTGASKSLKQVNDQVFSAEIMGKGAAIVPSADQVVAPADGVITVTYDSHHAYGIKTTAGAEIL
IHLGLDTVNLNGEHFTTNVQKGDTVHQGDLLGTFDIAALKAANYDPTVMLIVTNTANYANVERLKVTNVQAGEQLVALTA
PAASSVAATTV
>Mature_651_residues
MNHQEVADRVLNAIGKNNIQAAAHCATRLRLVIKDESKIDQQALDDDADVKGTFETNGQYQIIIGPGDVDKVYDALIAKT
GLKEVTPDDIKAVAAAGQKKNPLMDFLKVLSDIFIPIVPALVAGGLLMALNNVLTAEHLFMAKSVVEVYPGLKGIAEMIN
AMASAPFTFLPILLGFSATKRFGGNPYLGATMGMIMVLPSLVNGYSVATTMAAGKMVYWNVFGLHVAQAGYQGQVLPVLG
VAFILATLEKFFHKHIKGAFDFTFTPMFAIVITGFLTFTIVGPVLRTVSDALTNGLVGLYNSTGWIGMGIFGLLYSAIVI
TGLHQTFPAIETQLLANVAKTGGSFIFPVASMANIGQGAATLAIFFATKSQKQKALTSSAGVSALLGITEPAIFGVNLKM
KFPFVFAAIASGIASAFLGLFHVLSVAMGPASVIGFISIASKSIPAFMLSAVISFVVAFIPTFIYAKRTLGDDRDQVKSP
APTSTVINVNDEIISAPVTGASKSLKQVNDQVFSAEIMGKGAAIVPSADQVVAPADGVITVTYDSHHAYGIKTTAGAEIL
IHLGLDTVNLNGEHFTTNVQKGDTVHQGDLLGTFDIAALKAANYDPTVMLIVTNTANYANVERLKVTNVQAGEQLVALTA
PAASSVAATTV

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1263

COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790159, Length=649, Percent_Identity=30.3543913713405, Blast_Score=288, Evalue=6e-79,
Organism=Escherichia coli, GI2367362, Length=469, Percent_Identity=31.1300639658849, Blast_Score=251, Evalue=1e-67,
Organism=Escherichia coli, GI48994906, Length=425, Percent_Identity=26.3529411764706, Blast_Score=145, Evalue=7e-36,
Organism=Escherichia coli, GI1788769, Length=501, Percent_Identity=27.5449101796407, Blast_Score=135, Evalue=9e-33,
Organism=Escherichia coli, GI1788757, Length=133, Percent_Identity=33.8345864661654, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786894, Length=130, Percent_Identity=33.0769230769231, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR018113
- InterPro:   IPR001127
- InterPro:   IPR001996
- InterPro:   IPR003352
- InterPro:   IPR013013
- InterPro:   IPR011535
- InterPro:   IPR010973 [H]

Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 68424; Mature: 68424

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHQEVADRVLNAIGKNNIQAAAHCATRLRLVIKDESKIDQQALDDDADVKGTFETNGQY
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCHHHHHHHCCCCCCCCEEEECCCEE
QIIIGPGDVDKVYDALIAKTGLKEVTPDDIKAVAAAGQKKNPLMDFLKVLSDIFIPIVPA
EEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LVAGGLLMALNNVLTAEHLFMAKSVVEVYPGLKGIAEMINAMASAPFTFLPILLGFSATK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHH
RFGGNPYLGATMGMIMVLPSLVNGYSVATTMAAGKMVYWNVFGLHVAQAGYQGQVLPVLG
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEHHHHHHHCCCCCCCHHHHHH
VAFILATLEKFFHKHIKGAFDFTFTPMFAIVITGFLTFTIVGPVLRTVSDALTNGLVGLY
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
NSTGWIGMGIFGLLYSAIVITGLHQTFPAIETQLLANVAKTGGSFIFPVASMANIGQGAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCHH
TLAIFFATKSQKQKALTSSAGVSALLGITEPAIFGVNLKMKFPFVFAAIASGIASAFLGL
EEEEEEECCCHHHHHHHHHCCHHHHHCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHH
FHVLSVAMGPASVIGFISIASKSIPAFMLSAVISFVVAFIPTFIYAKRTLGDDRDQVKSP
HHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
APTSTVINVNDEIISAPVTGASKSLKQVNDQVFSAEIMGKGAAIVPSADQVVAPADGVIT
CCCCEEEECCHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEECCCCCEEE
VTYDSHHAYGIKTTAGAEILIHLGLDTVNLNGEHFTTNVQKGDTVHQGDLLGTFDIAALK
EEECCCCEECEEECCCCEEEEEECCEEEECCCCEEEECCCCCCCEECCCCCEEHHHHHHH
AANYDPTVMLIVTNTANYANVERLKVTNVQAGEQLVALTAPAASSVAATTV
CCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNHQEVADRVLNAIGKNNIQAAAHCATRLRLVIKDESKIDQQALDDDADVKGTFETNGQY
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCHHHHHHHCCCCCCCCEEEECCCEE
QIIIGPGDVDKVYDALIAKTGLKEVTPDDIKAVAAAGQKKNPLMDFLKVLSDIFIPIVPA
EEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LVAGGLLMALNNVLTAEHLFMAKSVVEVYPGLKGIAEMINAMASAPFTFLPILLGFSATK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHH
RFGGNPYLGATMGMIMVLPSLVNGYSVATTMAAGKMVYWNVFGLHVAQAGYQGQVLPVLG
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEHHHHHHHCCCCCCCHHHHHH
VAFILATLEKFFHKHIKGAFDFTFTPMFAIVITGFLTFTIVGPVLRTVSDALTNGLVGLY
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
NSTGWIGMGIFGLLYSAIVITGLHQTFPAIETQLLANVAKTGGSFIFPVASMANIGQGAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCHH
TLAIFFATKSQKQKALTSSAGVSALLGITEPAIFGVNLKMKFPFVFAAIASGIASAFLGL
EEEEEEECCCHHHHHHHHHCCHHHHHCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHH
FHVLSVAMGPASVIGFISIASKSIPAFMLSAVISFVVAFIPTFIYAKRTLGDDRDQVKSP
HHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
APTSTVINVNDEIISAPVTGASKSLKQVNDQVFSAEIMGKGAAIVPSADQVVAPADGVIT
CCCCEEEECCHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEECCCCCEEE
VTYDSHHAYGIKTTAGAEILIHLGLDTVNLNGEHFTTNVQKGDTVHQGDLLGTFDIAALK
EEECCCCEECEEECCCCEEEEEECCEEEECCCCEEEECCCCCCCEECCCCCEEHHHHHHH
AANYDPTVMLIVTNTANYANVERLKVTNVQAGEQLVALTAPAASSVAATTV
CCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA