| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492092
Identifier: 116492092
GI number: 116492092
Start: 332784
End: 333956
Strand: Reverse
Name: 116492092
Synonym: PEPE_0288
Alternate gene names: NA
Gene position: 333956-332784 (Counterclockwise)
Preceding gene: 116492098
Following gene: 116492091
Centisome position: 18.23
GC content: 39.13
Gene sequence:
>1173_bases ATGAGTAATTTTATTCTCGATCAACAATACCAAGAAGAAATTTATCAACTATATCTATATGCATTTAATGCGCAAGATAG CGCTAACCGTCGCGATTTCTGGAATCGTCGTTTCCAACACGCTATTCCCTATGGAATCTCCGTTGACGGTCAAATTGAAA CTAGTATTTTAAGTATTCCTTTTGAAACAAATTTTTTTGGAACCAATTTTAAAATGAACGGTATTAGCGATGTGATGAGC GCTCCCGAAGCATCTGGTAAAGGGGGCGCGAGCCAATTGATGAAAGCTGCTTTACAGGATATGTATGACAACCAGGTAAC TTTGTCCTACCTCGCACCATTTGCTTTCAGTTACTATCGACGCTTTGGCTATGAACAAGTTTTTGACCATGTTACCTACA CTATGGCTAGCGATAAATTACCACGTATTTCAAAAAATACCGAAAACGTCCAAGTTAAACGCCTTGACTTTAGTTCAAAT ACTGATTTACTAAAATCAATCTATCAACAGTCTCCACTAGCTCAACGGGGAGGTTTAAACCGAGCCGATTGGTGGTGGGA TTATCTACCTAAAAAATTTGCTAATCGCCAACTGGCCGTAGCTTTTGAACATCAACAACCTACTGGTTATGTCATCTACG AACGTACCGCTAGCGAATTTATCATTTACGAAGTTGCTAACACCGATATTGAAAGTCGCCAAGCACTTTGGAAATTCGTC ACCAAGCATGGAACTACTGCCGAAAACTTTATCTATCAAAGCCCTGTCGCTGATATCGATTTTGATCTAGTCGACGAACC TTATAGCGTGACAACTACCGTCCAGCCTTATATGATGGCCCGAATTGTTAATTTGCAAGACTTCTTAGAAAAGTATCCTA CATCAACTCCAGCTAAGTTCACCCTGGATGTTATTGATGATGTCCTTTCTGAAAATAATGGACATTGGACTTTTGAATTT GACGGAAAAGTACGTTCGGTTCAAAAATCAAACGTACCATTAGATACTCATACCGCGATTACAATCCAACAATTAACTAA AATTCTTTTTGGATATCGCTCAGCAGCATCCTTGGTAGAACATGGAAAAATCGTCGGTTGGACATCAGATAACGTAAAAA ACTTAGATGCCATCACCGTACCTCAGAAACCTATTTTGGCAGATTATTTCTAA
Upstream 100 bases:
>100_bases ATTATAACAAAAAAATTTTAATATGGGACGTCTAATTTTAAGATAACGTTTTCAAAAATGGTATAATGATAGTATTAATC ACGTTTTGGGGGAACTAGTA
Downstream 100 bases:
>100_bases TTATTGCTAAAACTATTACTTCAAAAAAACAAACATCTATATTTAATGATGTTTGTTTTTTACTATCTCAGTGCCATTTA GTGTTACCATAATTTGTAAA
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase Gnat Family; Eis Acetyltransferase-Like Acetyltransferase; Gcn5-Like N-Acetyltransferase; Acetyltransferase Involved In Intracellular Survival; Acetyltransferase Eis Type
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSNFILDQQYQEEIYQLYLYAFNAQDSANRRDFWNRRFQHAIPYGISVDGQIETSILSIPFETNFFGTNFKMNGISDVMS APEASGKGGASQLMKAALQDMYDNQVTLSYLAPFAFSYYRRFGYEQVFDHVTYTMASDKLPRISKNTENVQVKRLDFSSN TDLLKSIYQQSPLAQRGGLNRADWWWDYLPKKFANRQLAVAFEHQQPTGYVIYERTASEFIIYEVANTDIESRQALWKFV TKHGTTAENFIYQSPVADIDFDLVDEPYSVTTTVQPYMMARIVNLQDFLEKYPTSTPAKFTLDVIDDVLSENNGHWTFEF DGKVRSVQKSNVPLDTHTAITIQQLTKILFGYRSAASLVEHGKIVGWTSDNVKNLDAITVPQKPILADYF
Sequences:
>Translated_390_residues MSNFILDQQYQEEIYQLYLYAFNAQDSANRRDFWNRRFQHAIPYGISVDGQIETSILSIPFETNFFGTNFKMNGISDVMS APEASGKGGASQLMKAALQDMYDNQVTLSYLAPFAFSYYRRFGYEQVFDHVTYTMASDKLPRISKNTENVQVKRLDFSSN TDLLKSIYQQSPLAQRGGLNRADWWWDYLPKKFANRQLAVAFEHQQPTGYVIYERTASEFIIYEVANTDIESRQALWKFV TKHGTTAENFIYQSPVADIDFDLVDEPYSVTTTVQPYMMARIVNLQDFLEKYPTSTPAKFTLDVIDDVLSENNGHWTFEF DGKVRSVQKSNVPLDTHTAITIQQLTKILFGYRSAASLVEHGKIVGWTSDNVKNLDAITVPQKPILADYF >Mature_389_residues SNFILDQQYQEEIYQLYLYAFNAQDSANRRDFWNRRFQHAIPYGISVDGQIETSILSIPFETNFFGTNFKMNGISDVMSA PEASGKGGASQLMKAALQDMYDNQVTLSYLAPFAFSYYRRFGYEQVFDHVTYTMASDKLPRISKNTENVQVKRLDFSSNT DLLKSIYQQSPLAQRGGLNRADWWWDYLPKKFANRQLAVAFEHQQPTGYVIYERTASEFIIYEVANTDIESRQALWKFVT KHGTTAENFIYQSPVADIDFDLVDEPYSVTTTVQPYMMARIVNLQDFLEKYPTSTPAKFTLDVIDDVLSENNGHWTFEFD GKVRSVQKSNVPLDTHTAITIQQLTKILFGYRSAASLVEHGKIVGWTSDNVKNLDAITVPQKPILADYF
Specific function: Unknown
COG id: COG4552
COG function: function code R; Predicted acetyltransferase involved in intracellular survival and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44810; Mature: 44678
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFILDQQYQEEIYQLYLYAFNAQDSANRRDFWNRRFQHAIPYGISVDGQIETSILSIP CCCCCCCHHHHHHHHHEEHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC FETNFFGTNFKMNGISDVMSAPEASGKGGASQLMKAALQDMYDNQVTLSYLAPFAFSYYR CCCCCCCCCEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH RFGYEQVFDHVTYTMASDKLPRISKNTENVQVKRLDFSSNTDLLKSIYQQSPLAQRGGLN HHCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHCCCC RADWWWDYLPKKFANRQLAVAFEHQQPTGYVIYERTASEFIIYEVANTDIESRQALWKFV CCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHH TKHGTTAENFIYQSPVADIDFDLVDEPYSVTTTVQPYMMARIVNLQDFLEKYPTSTPAKF HHCCCCHHHEEEECCCCCCCHHCCCCCCEEEEECHHHHHHHHHCHHHHHHHCCCCCCCEE TLDVIDDVLSENNGHWTFEFDGKVRSVQKSNVPLDTHTAITIQQLTKILFGYRSAASLVE EHHHHHHHHHCCCCEEEEEECCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HGKIVGWTSDNVKNLDAITVPQKPILADYF CCCEEEECCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure SNFILDQQYQEEIYQLYLYAFNAQDSANRRDFWNRRFQHAIPYGISVDGQIETSILSIP CCCCCCHHHHHHHHHEEHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC FETNFFGTNFKMNGISDVMSAPEASGKGGASQLMKAALQDMYDNQVTLSYLAPFAFSYYR CCCCCCCCCEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH RFGYEQVFDHVTYTMASDKLPRISKNTENVQVKRLDFSSNTDLLKSIYQQSPLAQRGGLN HHCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHCCCC RADWWWDYLPKKFANRQLAVAFEHQQPTGYVIYERTASEFIIYEVANTDIESRQALWKFV CCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHH TKHGTTAENFIYQSPVADIDFDLVDEPYSVTTTVQPYMMARIVNLQDFLEKYPTSTPAKF HHCCCCHHHEEEECCCCCCCHHCCCCCCEEEEECHHHHHHHHHCHHHHHHHCCCCCCCEE TLDVIDDVLSENNGHWTFEFDGKVRSVQKSNVPLDTHTAITIQQLTKILFGYRSAASLVE EHHHHHHHHHCCCCEEEEEECCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HGKIVGWTSDNVKNLDAITVPQKPILADYF CCCEEEECCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA