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The map label for this gene is 116492091

Identifier: 116492091

GI number: 116492091

Start: 332076

End: 332660

Strand: Reverse

Name: 116492091

Synonym: PEPE_0287

Alternate gene names: NA

Gene position: 332660-332076 (Counterclockwise)

Preceding gene: 116492092

Following gene: 116492084

Centisome position: 18.15

GC content: 37.95

Gene sequence:

>585_bases
ATGGACTACAACATGCCTTTTTTCGAAGAAATCATGCAAGATCCTCAAAATGCAATTTATACTGCTAAAGGATGGCATCC
AATTTATAGTATTAATCCCCAAGCAAAAATTTTAATTGTGGGACAAGCCCCCGGAAAAAAAGTCCAAGATACGGAAATTA
TGTGGAACGACCAAAGTGGTGATCGTTTACGCGCTTGGATGGGAATTTCACGGGATACTTTTTATAATTCTGGTGATATT
GCGGTAATTCCAATGGATTTCTATTATCCTGGTAAAGCTAAAAGTGGCGACGTTCCGCCTCGTAAAGAAGTTGCTGAAAA
ATGGCATCAAAAAATGCTGGATATTATGCCTAACATCCAGCTTACTCTGTTAATCGGATCCTATGCGCAAAAACATTATT
TAAATGTTCCTCGCTCTACCACTACAACTAATCTGGTGCAAAATTATCGTAACTTTCTTCCCGAATACTTTCCTTTGGTG
CATCCTTCACCTCGTAACAACATTTGGCTGGCTAAAAATCCTTGGTTCGAGCAGGAAGTTGTGCCTGAATTACAAAAAAT
CGTTCAAAATATCCTTAAAAAATAA

Upstream 100 bases:

>100_bases
AAAAAACAAACATCTATATTTAATGATGTTTGTTTTTTACTATCTCAGTGCCATTTAGTGTTACCATAATTTGTAAATAG
TTTTAAAGGAAGGATTAACG

Downstream 100 bases:

>100_bases
AAAACTTTCGAAACAGTTCCCCTGTTTCAAAAGTTTTTTTATTTTAATGAAATTGCATTCCACCATCTACAATAATTGTT
TGTCCAGTTACATAATTTGA

Product: Uracil-DNA glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MDYNMPFFEEIMQDPQNAIYTAKGWHPIYSINPQAKILIVGQAPGKKVQDTEIMWNDQSGDRLRAWMGISRDTFYNSGDI
AVIPMDFYYPGKAKSGDVPPRKEVAEKWHQKMLDIMPNIQLTLLIGSYAQKHYLNVPRSTTTTNLVQNYRNFLPEYFPLV
HPSPRNNIWLAKNPWFEQEVVPELQKIVQNILKK

Sequences:

>Translated_194_residues
MDYNMPFFEEIMQDPQNAIYTAKGWHPIYSINPQAKILIVGQAPGKKVQDTEIMWNDQSGDRLRAWMGISRDTFYNSGDI
AVIPMDFYYPGKAKSGDVPPRKEVAEKWHQKMLDIMPNIQLTLLIGSYAQKHYLNVPRSTTTTNLVQNYRNFLPEYFPLV
HPSPRNNIWLAKNPWFEQEVVPELQKIVQNILKK
>Mature_194_residues
MDYNMPFFEEIMQDPQNAIYTAKGWHPIYSINPQAKILIVGQAPGKKVQDTEIMWNDQSGDRLRAWMGISRDTFYNSGDI
AVIPMDFYYPGKAKSGDVPPRKEVAEKWHQKMLDIMPNIQLTLLIGSYAQKHYLNVPRSTTTTNLVQNYRNFLPEYFPLV
HPSPRNNIWLAKNPWFEQEVVPELQKIVQNILKK

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 22612; Mature: 22612

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYNMPFFEEIMQDPQNAIYTAKGWHPIYSINPQAKILIVGQAPGKKVQDTEIMWNDQSG
CCCCCHHHHHHHHCHHHCEEECCCCCEEEEECCCEEEEEEECCCCCCCCCCEEEECCCCC
DRLRAWMGISRDTFYNSGDIAVIPMDFYYPGKAKSGDVPPRKEVAEKWHQKMLDIMPNIQ
CHHHHHHCCCHHCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE
LTLLIGSYAQKHYLNVPRSTTTTNLVQNYRNFLPEYFPLVHPSPRNNIWLAKNPWFEQEV
EEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCEEEECCCCCHHHH
VPELQKIVQNILKK
HHHHHHHHHHHHCC
>Mature Secondary Structure
MDYNMPFFEEIMQDPQNAIYTAKGWHPIYSINPQAKILIVGQAPGKKVQDTEIMWNDQSG
CCCCCHHHHHHHHCHHHCEEECCCCCEEEEECCCEEEEEEECCCCCCCCCCEEEECCCCC
DRLRAWMGISRDTFYNSGDIAVIPMDFYYPGKAKSGDVPPRKEVAEKWHQKMLDIMPNIQ
CHHHHHHCCCHHCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE
LTLLIGSYAQKHYLNVPRSTTTTNLVQNYRNFLPEYFPLVHPSPRNNIWLAKNPWFEQEV
EEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCEEEECCCCCHHHH
VPELQKIVQNILKK
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]