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The map label for this gene is 116492098

Identifier: 116492098

GI number: 116492098

Start: 338953

End: 339525

Strand: Reverse

Name: 116492098

Synonym: PEPE_0294

Alternate gene names: NA

Gene position: 339525-338953 (Counterclockwise)

Preceding gene: 116492101

Following gene: 116492092

Centisome position: 18.53

GC content: 36.13

Gene sequence:

>573_bases
TTGAAAATTACAGTATTTTGTGGTGTACGTTTTGGGAACCAAAAAAATTATGGTGAAACAGCTCGATTAATCGGCAATGA
ACTTGCCAAAAGAAAGATTGAACTAGTCTATGGTGGTTCTACATCTGGAACGATGGGAGCTATTAGTCAAGCCGTACTTG
AAAATGGAGGAAAAGTGACCGGTATTTATCCTGAGGGGCTATTTGAAGATGAACTTCCTCGAAAAAATACCACGTCCTTT
ATTCAAACGACTACTATGGCTCAGCGTAAGGAGCTATTAATTAACAGTGGCGATGCCTTTTTAATTCTTCCTGGAGGATT
AGGAACTTTAGAGGAACTAAGCCAGCTATTATCAAATATGGCGCTTGGTATCATCCCTCAAAGAAAAATTGGCATTCTAA
ATATTAATGGTTTTTATGATAACTTGATTCAACTATTAAATAATTTTATTGATGCTAAATTCATGGATGCATTACGTAAG
GATGATTTACTGATTAGTGCTGATTACCAAGTCTTGCTGGAAGAATTGACAGCCTCAGAAAGTAAATCGACTAAACAAGA
ACTTAGTGCATAA

Upstream 100 bases:

>100_bases
TCCTTCAAATATTCTTACGCACATTAATAAATACCATATATTGACATTCAAATACGACACCCACTATAATTAGTGTCTTG
ATGTTATTGGAGGGATAGAA

Downstream 100 bases:

>100_bases
TCTAAATTTAAATACCAAAAAAAGGATTGCCATGATAGCCACCCTAAAAGTTAGAATTTAGTCTAACTCTTAGCGGTCAC
TATCACTATAGCAATCCTTT

Product: Rossmann fold nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKITVFCGVRFGNQKNYGETARLIGNELAKRKIELVYGGSTSGTMGAISQAVLENGGKVTGIYPEGLFEDELPRKNTTSF
IQTTTMAQRKELLINSGDAFLILPGGLGTLEELSQLLSNMALGIIPQRKIGILNINGFYDNLIQLLNNFIDAKFMDALRK
DDLLISADYQVLLEELTASESKSTKQELSA

Sequences:

>Translated_190_residues
MKITVFCGVRFGNQKNYGETARLIGNELAKRKIELVYGGSTSGTMGAISQAVLENGGKVTGIYPEGLFEDELPRKNTTSF
IQTTTMAQRKELLINSGDAFLILPGGLGTLEELSQLLSNMALGIIPQRKIGILNINGFYDNLIQLLNNFIDAKFMDALRK
DDLLISADYQVLLEELTASESKSTKQELSA
>Mature_190_residues
MKITVFCGVRFGNQKNYGETARLIGNELAKRKIELVYGGSTSGTMGAISQAVLENGGKVTGIYPEGLFEDELPRKNTTSF
IQTTTMAQRKELLINSGDAFLILPGGLGTLEELSQLLSNMALGIIPQRKIGILNINGFYDNLIQLLNNFIDAKFMDALRK
DDLLISADYQVLLEELTASESKSTKQELSA

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=200, Percent_Identity=29, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20798; Mature: 20798

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITVFCGVRFGNQKNYGETARLIGNELAKRKIELVYGGSTSGTMGAISQAVLENGGKVT
CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCEEE
GIYPEGLFEDELPRKNTTSFIQTTTMAQRKELLINSGDAFLILPGGLGTLEELSQLLSNM
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCHHHHHHHHHHH
ALGIIPQRKIGILNINGFYDNLIQLLNNFIDAKFMDALRKDDLLISADYQVLLEELTASE
HHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHCCC
SKSTKQELSA
CHHHHHHHCC
>Mature Secondary Structure
MKITVFCGVRFGNQKNYGETARLIGNELAKRKIELVYGGSTSGTMGAISQAVLENGGKVT
CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCEEE
GIYPEGLFEDELPRKNTTSFIQTTTMAQRKELLINSGDAFLILPGGLGTLEELSQLLSNM
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCHHHHHHHHHHH
ALGIIPQRKIGILNINGFYDNLIQLLNNFIDAKFMDALRKDDLLISADYQVLLEELTASE
HHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHCCC
SKSTKQELSA
CHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]