| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492034
Identifier: 116492034
GI number: 116492034
Start: 266627
End: 267232
Strand: Reverse
Name: 116492034
Synonym: PEPE_0226
Alternate gene names: NA
Gene position: 267232-266627 (Counterclockwise)
Preceding gene: 116492036
Following gene: 116492029
Centisome position: 14.58
GC content: 39.77
Gene sequence:
>606_bases ATGTCAAATTCATTCTTAGATGCAATTAAAAAACGTCGTTCAATTTACGCTCTTGGTAAAAATGTTTCACTCAGTGAAGA TGAAATTACTGATTTAATTAAAGAAGCTATCCGTCAAAGTCCTTCAGCTTTTAACAGTCAAACGGTCCGCGCCGTAATCC TATTCGGTAAGGCCCATGATGAACTATGGGATGGCATTCTAGACATTCTTCATGGTGAGGTTCCGAACGAAGAGGCTTTC CAAGCTTCCAAAGCCAAGGTGGAAGGAGCTTTTAAGGCTGGAGTTGGTACAGTATTATTCTATACTGATGAAAAAGTTAT CGAGGACCTTAAAACTAACTTCCCATTGTATAAGGATGCTTTCGACATGTTTGGTGAACACGGAATGGGAATTGCCAACA TGGATGTTTGGACAACGCTTGCTAATGAAGGCATTGGGGCATCATTACAACATTACAATCCAATTGCTGACAAGTTCATC GCTGATAAATTTGATATTCCGGCTAACTGGACCCTTAAAGCCCAAATGCCATTTGGTTCAATTGAACAACCTGCCGGTGA CAAAGAATTCATGAATGACGAAGATCGTTTTCGCGTTATTAAATAA
Upstream 100 bases:
>100_bases CGGTCAAACAGAATTTTTCAAAATGCTTGCAATTGTTTTAAAATATCCCTATACTTAAGTTACTAATAAAAAGTAAGTAA CTTTAAAGGGGATTTTAAAT
Downstream 100 bases:
>100_bases TTAAAAAGTACAAAAAATAAGCTGTGGTAAAAGTTAAAAACTTTCCACAGCTTATTTTTATTTTAAGATAGCATGCCACT TTTGATAAACTTCATCGAAA
Product: oxidoreductase
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; Oxidoreductase Related Nitroreductase; Oxidoreductase/Nitroreductase; Oxidoreductase Related Nitroreductase-Like Protein; Oxydoreductase Related Nitroreductase; Ypothetical Protein SMU.
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSNSFLDAIKKRRSIYALGKNVSLSEDEITDLIKEAIRQSPSAFNSQTVRAVILFGKAHDELWDGILDILHGEVPNEEAF QASKAKVEGAFKAGVGTVLFYTDEKVIEDLKTNFPLYKDAFDMFGEHGMGIANMDVWTTLANEGIGASLQHYNPIADKFI ADKFDIPANWTLKAQMPFGSIEQPAGDKEFMNDEDRFRVIK
Sequences:
>Translated_201_residues MSNSFLDAIKKRRSIYALGKNVSLSEDEITDLIKEAIRQSPSAFNSQTVRAVILFGKAHDELWDGILDILHGEVPNEEAF QASKAKVEGAFKAGVGTVLFYTDEKVIEDLKTNFPLYKDAFDMFGEHGMGIANMDVWTTLANEGIGASLQHYNPIADKFI ADKFDIPANWTLKAQMPFGSIEQPAGDKEFMNDEDRFRVIK >Mature_200_residues SNSFLDAIKKRRSIYALGKNVSLSEDEITDLIKEAIRQSPSAFNSQTVRAVILFGKAHDELWDGILDILHGEVPNEEAFQ ASKAKVEGAFKAGVGTVLFYTDEKVIEDLKTNFPLYKDAFDMFGEHGMGIANMDVWTTLANEGIGASLQHYNPIADKFIA DKFDIPANWTLKAQMPFGSIEQPAGDKEFMNDEDRFRVIK
Specific function: Unknown
COG id: COG3560
COG function: function code R; Predicted oxidoreductase related to nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6319823, Length=194, Percent_Identity=31.9587628865979, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22470; Mature: 22338
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSFLDAIKKRRSIYALGKNVSLSEDEITDLIKEAIRQSPSAFNSQTVRAVILFGKAHD CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHH ELWDGILDILHGEVPNEEAFQASKAKVEGAFKAGVGTVLFYTDEKVIEDLKTNFPLYKDA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCHHHH FDMFGEHGMGIANMDVWTTLANEGIGASLQHYNPIADKFIADKFDIPANWTLKAQMPFGS HHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCC IEQPAGDKEFMNDEDRFRVIK CCCCCCCHHHCCCCCCEEECC >Mature Secondary Structure SNSFLDAIKKRRSIYALGKNVSLSEDEITDLIKEAIRQSPSAFNSQTVRAVILFGKAHD CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHH ELWDGILDILHGEVPNEEAFQASKAKVEGAFKAGVGTVLFYTDEKVIEDLKTNFPLYKDA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCHHHH FDMFGEHGMGIANMDVWTTLANEGIGASLQHYNPIADKFIADKFDIPANWTLKAQMPFGS HHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCC IEQPAGDKEFMNDEDRFRVIK CCCCCCCHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA