Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492028

Identifier: 116492028

GI number: 116492028

Start: 259668

End: 260687

Strand: Reverse

Name: 116492028

Synonym: PEPE_0220

Alternate gene names: NA

Gene position: 260687-259668 (Counterclockwise)

Preceding gene: 116492029

Following gene: 116492027

Centisome position: 14.23

GC content: 36.18

Gene sequence:

>1020_bases
ATGTTTATAATTGGTATTTCGATAATTATTTTTTTGATTTCCGGAACTTATTTATATTTAGATCGGCGAGATTTTATTGC
GGGGATTGTTTTTGCTGGTAGTTGCATTAACTTAGCTTTATTATCCACTTTGTGGATTGCTAATTATCTGGCAGGAGGTT
CAAGAACTGGAATTATTAGCCTTGCGGTCTTCCTACTTTTAGGAATTGTTTTGACGCCGTTAGTAATCGGCTTCAGTTTG
ATTGTTAACACCTACATTATGCAAACTCGTGAAGGCAAAAGTTTAACTGCCAAATTATCGCTTATTTTAGGCCTTAATTT
TTTATTCATGTTGGTTGCTGGTTTAGCTATTTTGTTTTTGAATCAATTTTTAGGACGCTTCGTTGGAATTTTGCTTACCC
TTTTAGGGATTGATGTAACTTTAACTTTCATTTTTGTTTGTTATCTCTTTTATTCATTTCTTTATCAAGTGGTTCCGATC
AAAGGCAACGTGGATTATATTATTGTTTTAGGAGCGGGGGTACGATCTGAAACCGTAACTCCACTCTTAAAAGGACGCTT
GGATAAAGCCCTCGAATATTATCGAAGACAAAATGGCGCTGTGAAAATTGTGGTAAGTGGCGGACAAGGACCTGATGAAC
CCGTCTCAGAAGCTTTTGCCATGGCTAAGTACTTGAGAAACCAATCCGTACCCGAAGACAAAATTATTTTAGAAGACCAA
TCTACTACTACTTTCGAAAATATGCAGTTTTCCAAGCAGAAAATTGAAGCCGATTGGCAGGGAACCCAACCGCCTCAAAT
TATTTTTGCTACTAATAATTACCACGTCTTACGTGGCGTAATCTATGCGCGTAAAGCTGGCTTAAATGCTAACGGTGTAG
GATCACCAACTTCATTCTACTTTTTACCTAGTGCTTTAATCCGTGAATACATTGCACTATTAGTTATCTATAAAAAATTA
ACTGCTTTAATTTTACTAGGTTGGATAGCCTTGGGAATTTTATTAATCTCTAAAAACTAG

Upstream 100 bases:

>100_bases
CTTATAGTTTGATTGCAGGACCTTTTTATGATAATTTAGGTGAGTTATTAATGCACCTCAACACAATTATGACTAAATCA
ATAACATTGGGGGCTCTGCT

Downstream 100 bases:

>100_bases
GAGGTTTACTTATGCGAAAAGGAATGATTATCAGTGGCGTGGTCGTCGTAATTCTTTTAATTACTTTTGGAAGCGCCTAT
TTCTGGTATAACTCTAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MFIIGISIIIFLISGTYLYLDRRDFIAGIVFAGSCINLALLSTLWIANYLAGGSRTGIISLAVFLLLGIVLTPLVIGFSL
IVNTYIMQTREGKSLTAKLSLILGLNFLFMLVAGLAILFLNQFLGRFVGILLTLLGIDVTLTFIFVCYLFYSFLYQVVPI
KGNVDYIIVLGAGVRSETVTPLLKGRLDKALEYYRRQNGAVKIVVSGGQGPDEPVSEAFAMAKYLRNQSVPEDKIILEDQ
STTTFENMQFSKQKIEADWQGTQPPQIIFATNNYHVLRGVIYARKAGLNANGVGSPTSFYFLPSALIREYIALLVIYKKL
TALILLGWIALGILLISKN

Sequences:

>Translated_339_residues
MFIIGISIIIFLISGTYLYLDRRDFIAGIVFAGSCINLALLSTLWIANYLAGGSRTGIISLAVFLLLGIVLTPLVIGFSL
IVNTYIMQTREGKSLTAKLSLILGLNFLFMLVAGLAILFLNQFLGRFVGILLTLLGIDVTLTFIFVCYLFYSFLYQVVPI
KGNVDYIIVLGAGVRSETVTPLLKGRLDKALEYYRRQNGAVKIVVSGGQGPDEPVSEAFAMAKYLRNQSVPEDKIILEDQ
STTTFENMQFSKQKIEADWQGTQPPQIIFATNNYHVLRGVIYARKAGLNANGVGSPTSFYFLPSALIREYIALLVIYKKL
TALILLGWIALGILLISKN
>Mature_339_residues
MFIIGISIIIFLISGTYLYLDRRDFIAGIVFAGSCINLALLSTLWIANYLAGGSRTGIISLAVFLLLGIVLTPLVIGFSL
IVNTYIMQTREGKSLTAKLSLILGLNFLFMLVAGLAILFLNQFLGRFVGILLTLLGIDVTLTFIFVCYLFYSFLYQVVPI
KGNVDYIIVLGAGVRSETVTPLLKGRLDKALEYYRRQNGAVKIVVSGGQGPDEPVSEAFAMAKYLRNQSVPEDKIILEDQ
STTTFENMQFSKQKIEADWQGTQPPQIIFATNNYHVLRGVIYARKAGLNANGVGSPTSFYFLPSALIREYIALLVIYKKL
TALILLGWIALGILLISKN

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37406; Mature: 37406

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIIGISIIIFLISGTYLYLDRRDFIAGIVFAGSCINLALLSTLWIANYLAGGSRTGIIS
CEEEHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LAVFLLLGIVLTPLVIGFSLIVNTYIMQTREGKSLTAKLSLILGLNFLFMLVAGLAILFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQFLGRFVGILLTLLGIDVTLTFIFVCYLFYSFLYQVVPIKGNVDYIIVLGAGVRSETVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCHHHH
PLLKGRLDKALEYYRRQNGAVKIVVSGGQGPDEPVSEAFAMAKYLRNQSVPEDKIILEDQ
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECC
STTTFENMQFSKQKIEADWQGTQPPQIIFATNNYHVLRGVIYARKAGLNANGVGSPTSFY
CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHH
FLPSALIREYIALLVIYKKLTALILLGWIALGILLISKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFIIGISIIIFLISGTYLYLDRRDFIAGIVFAGSCINLALLSTLWIANYLAGGSRTGIIS
CEEEHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LAVFLLLGIVLTPLVIGFSLIVNTYIMQTREGKSLTAKLSLILGLNFLFMLVAGLAILFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQFLGRFVGILLTLLGIDVTLTFIFVCYLFYSFLYQVVPIKGNVDYIIVLGAGVRSETVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCHHHH
PLLKGRLDKALEYYRRQNGAVKIVVSGGQGPDEPVSEAFAMAKYLRNQSVPEDKIILEDQ
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECC
STTTFENMQFSKQKIEADWQGTQPPQIIFATNNYHVLRGVIYARKAGLNANGVGSPTSFY
CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHH
FLPSALIREYIALLVIYKKLTALILLGWIALGILLISKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA