| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492027
Identifier: 116492027
GI number: 116492027
Start: 259285
End: 259656
Strand: Reverse
Name: 116492027
Synonym: PEPE_0219
Alternate gene names: NA
Gene position: 259656-259285 (Counterclockwise)
Preceding gene: 116492028
Following gene: 116492026
Centisome position: 14.17
GC content: 36.02
Gene sequence:
>372_bases ATGCGAAAAGGAATGATTATCAGTGGCGTGGTCGTCGTAATTCTTTTAATTACTTTTGGAAGCGCCTATTTCTGGTATAA CTCTAACTATGGTACTCAGGATTACTACACTCAAATCGTCGATAAAGGCACTAAATTTGTGGAAAAAGATGATTCCAATC GTAGTTATGTGAATTATGCTTACCACCAACCTGCTTATAACCAAGCTAGTCAAAAGATAACGGTTAAATTTAACGGAAAC CTAGAACGTCCATTAAAGCTCCACGCATATTTGAAAATTGGCTACAATGCGAAACGAAATCAAGTTATTTCTTGGAGTAA AGTTGATAAAAAAGACGTTCCCAAGGCAGCCTTGAAACAAATTAATCCTTAA
Upstream 100 bases:
>100_bases TTGCACTATTAGTTATCTATAAAAAATTAACTGCTTTAATTTTACTAGGTTGGATAGCCTTGGGAATTTTATTAATCTCT AAAAACTAGGAGGTTTACTT
Downstream 100 bases:
>100_bases TTTCTTCAAAGCACTTTAACGTTAGCTTTTTTCAAAAATGTGCCTTAAAATATGGGTAGAGGTGATGGATAATGACACGA AAAATTGGAATCATTGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MRKGMIISGVVVVILLITFGSAYFWYNSNYGTQDYYTQIVDKGTKFVEKDDSNRSYVNYAYHQPAYNQASQKITVKFNGN LERPLKLHAYLKIGYNAKRNQVISWSKVDKKDVPKAALKQINP
Sequences:
>Translated_123_residues MRKGMIISGVVVVILLITFGSAYFWYNSNYGTQDYYTQIVDKGTKFVEKDDSNRSYVNYAYHQPAYNQASQKITVKFNGN LERPLKLHAYLKIGYNAKRNQVISWSKVDKKDVPKAALKQINP >Mature_123_residues MRKGMIISGVVVVILLITFGSAYFWYNSNYGTQDYYTQIVDKGTKFVEKDDSNRSYVNYAYHQPAYNQASQKITVKFNGN LERPLKLHAYLKIGYNAKRNQVISWSKVDKKDVPKAALKQINP
Specific function: Unknown
COG id: COG5294
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14176; Mature: 14176
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKGMIISGVVVVILLITFGSAYFWYNSNYGTQDYYTQIVDKGTKFVEKDDSNRSYVNYA CCCCEEHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCEEEEE YHQPAYNQASQKITVKFNGNLERPLKLHAYLKIGYNAKRNQVISWSKVDKKDVPKAALKQ ECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHC INP CCC >Mature Secondary Structure MRKGMIISGVVVVILLITFGSAYFWYNSNYGTQDYYTQIVDKGTKFVEKDDSNRSYVNYA CCCCEEHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCEEEEE YHQPAYNQASQKITVKFNGNLERPLKLHAYLKIGYNAKRNQVISWSKVDKKDVPKAALKQ ECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHC INP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA