Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116491935

Identifier: 116491935

GI number: 116491935

Start: 144681

End: 145412

Strand: Reverse

Name: 116491935

Synonym: PEPE_0121

Alternate gene names: NA

Gene position: 145412-144681 (Counterclockwise)

Preceding gene: 116491936

Following gene: 116491934

Centisome position: 7.94

GC content: 40.44

Gene sequence:

>732_bases
ATGAAAAAATCACAATGGTTTTGGGGCACATTATTCGTTTTAGCTGCGGCTGTTTTAGTAGCAACGCAGATGGGTTGGAC
GGCGTTCACCTTAAATCCGTTCTCCGTCGTCGCTTCTGTATTTTTAATTGCTGCACTGGTCGTCAGCCTCGTCCACTTGT
CCATCGCTGGAACCATCTTTTCAATTGCATTTTTATTAATGCTATATGGTAAACCCCTTGGTATCAGTAGTCTCGTGCCA
TGGACCATTCTGTTAGCGGCCGTTCTTCTAACAATTGGTCTATCACTAATTTTTCATCCTTATCGCCGAAATTGGCAAAA
GCATGCACTATGGAAAAATTTTCAGCATGGTTTTAATCATCACCCAGACTACGATTATACTGAAAGTACGCAGTCCGCTG
ATGATGACGTAATCAATATTGAAACTAGCATGAGTAGTGGTATTCATTATATTCAATCTCAAGATTTGAAAAGCATCAAT
GTAAATAACTACATGGGAACTACTAAGGTGTATTTTGATCAAGCCCATCTTGAGGATTCTGCCACTGCCAACATCAATTG
CCAACTGGGAAACATCACACTATATCTCCCCCACGATTGGAATATCGTGACTGATATTAACTCTGTAATGTCTGGCATTG
ATGAACGGGGAATTCGCAATTCTGGTACAGGTCCAACCCTTTATATTAAAGGCAAACTTTACTTAAGTGGTGTTACTTTG
CACTACGTCTAA

Upstream 100 bases:

>100_bases
CTGCTTAGTCCAATTTCAAAACTCGCATAAACAAGTTTATGCATCTCGTCGGTACTATAAATCATTACAAGAACATTTAA
AAAAGTTGAGGTAATTAATT

Downstream 100 bases:

>100_bases
TTTAAATTAATGCCCACTTTGATTCCAAAATAGTCCGCTTGCTAATTGACAAAACGAACGTTTGTTCGTATAATTTACTT
ATCAAAAAGAGGTCGATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKKSQWFWGTLFVLAAAVLVATQMGWTAFTLNPFSVVASVFLIAALVVSLVHLSIAGTIFSIAFLLMLYGKPLGISSLVP
WTILLAAVLLTIGLSLIFHPYRRNWQKHALWKNFQHGFNHHPDYDYTESTQSADDDVINIETSMSSGIHYIQSQDLKSIN
VNNYMGTTKVYFDQAHLEDSATANINCQLGNITLYLPHDWNIVTDINSVMSGIDERGIRNSGTGPTLYIKGKLYLSGVTL
HYV

Sequences:

>Translated_243_residues
MKKSQWFWGTLFVLAAAVLVATQMGWTAFTLNPFSVVASVFLIAALVVSLVHLSIAGTIFSIAFLLMLYGKPLGISSLVP
WTILLAAVLLTIGLSLIFHPYRRNWQKHALWKNFQHGFNHHPDYDYTESTQSADDDVINIETSMSSGIHYIQSQDLKSIN
VNNYMGTTKVYFDQAHLEDSATANINCQLGNITLYLPHDWNIVTDINSVMSGIDERGIRNSGTGPTLYIKGKLYLSGVTL
HYV
>Mature_243_residues
MKKSQWFWGTLFVLAAAVLVATQMGWTAFTLNPFSVVASVFLIAALVVSLVHLSIAGTIFSIAFLLMLYGKPLGISSLVP
WTILLAAVLLTIGLSLIFHPYRRNWQKHALWKNFQHGFNHHPDYDYTESTQSADDDVINIETSMSSGIHYIQSQDLKSIN
VNNYMGTTKVYFDQAHLEDSATANINCQLGNITLYLPHDWNIVTDINSVMSGIDERGIRNSGTGPTLYIKGKLYLSGVTL
HYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27087; Mature: 27087

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSQWFWGTLFVLAAAVLVATQMGWTAFTLNPFSVVASVFLIAALVVSLVHLSIAGTIF
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIAFLLMLYGKPLGISSLVPWTILLAAVLLTIGLSLIFHPYRRNWQKHALWKNFQHGFNH
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
HPDYDYTESTQSADDDVINIETSMSSGIHYIQSQDLKSINVNNYMGTTKVYFDQAHLEDS
CCCCCCCCCCCCCCCCEEEEEECHHHCCHHHHCCCCCEECCCCCCCCEEEEEEHHHCCCC
ATANINCQLGNITLYLPHDWNIVTDINSVMSGIDERGIRNSGTGPTLYIKGKLYLSGVTL
CCEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEE
HYV
EEC
>Mature Secondary Structure
MKKSQWFWGTLFVLAAAVLVATQMGWTAFTLNPFSVVASVFLIAALVVSLVHLSIAGTIF
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIAFLLMLYGKPLGISSLVPWTILLAAVLLTIGLSLIFHPYRRNWQKHALWKNFQHGFNH
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
HPDYDYTESTQSADDDVINIETSMSSGIHYIQSQDLKSINVNNYMGTTKVYFDQAHLEDS
CCCCCCCCCCCCCCCCEEEEEECHHHCCHHHHCCCCCEECCCCCCCCEEEEEEHHHCCCC
ATANINCQLGNITLYLPHDWNIVTDINSVMSGIDERGIRNSGTGPTLYIKGKLYLSGVTL
CCEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEE
HYV
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA