| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491935
Identifier: 116491935
GI number: 116491935
Start: 144681
End: 145412
Strand: Reverse
Name: 116491935
Synonym: PEPE_0121
Alternate gene names: NA
Gene position: 145412-144681 (Counterclockwise)
Preceding gene: 116491936
Following gene: 116491934
Centisome position: 7.94
GC content: 40.44
Gene sequence:
>732_bases ATGAAAAAATCACAATGGTTTTGGGGCACATTATTCGTTTTAGCTGCGGCTGTTTTAGTAGCAACGCAGATGGGTTGGAC GGCGTTCACCTTAAATCCGTTCTCCGTCGTCGCTTCTGTATTTTTAATTGCTGCACTGGTCGTCAGCCTCGTCCACTTGT CCATCGCTGGAACCATCTTTTCAATTGCATTTTTATTAATGCTATATGGTAAACCCCTTGGTATCAGTAGTCTCGTGCCA TGGACCATTCTGTTAGCGGCCGTTCTTCTAACAATTGGTCTATCACTAATTTTTCATCCTTATCGCCGAAATTGGCAAAA GCATGCACTATGGAAAAATTTTCAGCATGGTTTTAATCATCACCCAGACTACGATTATACTGAAAGTACGCAGTCCGCTG ATGATGACGTAATCAATATTGAAACTAGCATGAGTAGTGGTATTCATTATATTCAATCTCAAGATTTGAAAAGCATCAAT GTAAATAACTACATGGGAACTACTAAGGTGTATTTTGATCAAGCCCATCTTGAGGATTCTGCCACTGCCAACATCAATTG CCAACTGGGAAACATCACACTATATCTCCCCCACGATTGGAATATCGTGACTGATATTAACTCTGTAATGTCTGGCATTG ATGAACGGGGAATTCGCAATTCTGGTACAGGTCCAACCCTTTATATTAAAGGCAAACTTTACTTAAGTGGTGTTACTTTG CACTACGTCTAA
Upstream 100 bases:
>100_bases CTGCTTAGTCCAATTTCAAAACTCGCATAAACAAGTTTATGCATCTCGTCGGTACTATAAATCATTACAAGAACATTTAA AAAAGTTGAGGTAATTAATT
Downstream 100 bases:
>100_bases TTTAAATTAATGCCCACTTTGATTCCAAAATAGTCCGCTTGCTAATTGACAAAACGAACGTTTGTTCGTATAATTTACTT ATCAAAAAGAGGTCGATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKKSQWFWGTLFVLAAAVLVATQMGWTAFTLNPFSVVASVFLIAALVVSLVHLSIAGTIFSIAFLLMLYGKPLGISSLVP WTILLAAVLLTIGLSLIFHPYRRNWQKHALWKNFQHGFNHHPDYDYTESTQSADDDVINIETSMSSGIHYIQSQDLKSIN VNNYMGTTKVYFDQAHLEDSATANINCQLGNITLYLPHDWNIVTDINSVMSGIDERGIRNSGTGPTLYIKGKLYLSGVTL HYV
Sequences:
>Translated_243_residues MKKSQWFWGTLFVLAAAVLVATQMGWTAFTLNPFSVVASVFLIAALVVSLVHLSIAGTIFSIAFLLMLYGKPLGISSLVP WTILLAAVLLTIGLSLIFHPYRRNWQKHALWKNFQHGFNHHPDYDYTESTQSADDDVINIETSMSSGIHYIQSQDLKSIN VNNYMGTTKVYFDQAHLEDSATANINCQLGNITLYLPHDWNIVTDINSVMSGIDERGIRNSGTGPTLYIKGKLYLSGVTL HYV >Mature_243_residues MKKSQWFWGTLFVLAAAVLVATQMGWTAFTLNPFSVVASVFLIAALVVSLVHLSIAGTIFSIAFLLMLYGKPLGISSLVP WTILLAAVLLTIGLSLIFHPYRRNWQKHALWKNFQHGFNHHPDYDYTESTQSADDDVINIETSMSSGIHYIQSQDLKSIN VNNYMGTTKVYFDQAHLEDSATANINCQLGNITLYLPHDWNIVTDINSVMSGIDERGIRNSGTGPTLYIKGKLYLSGVTL HYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27087; Mature: 27087
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSQWFWGTLFVLAAAVLVATQMGWTAFTLNPFSVVASVFLIAALVVSLVHLSIAGTIF CCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIAFLLMLYGKPLGISSLVPWTILLAAVLLTIGLSLIFHPYRRNWQKHALWKNFQHGFNH HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC HPDYDYTESTQSADDDVINIETSMSSGIHYIQSQDLKSINVNNYMGTTKVYFDQAHLEDS CCCCCCCCCCCCCCCCEEEEEECHHHCCHHHHCCCCCEECCCCCCCCEEEEEEHHHCCCC ATANINCQLGNITLYLPHDWNIVTDINSVMSGIDERGIRNSGTGPTLYIKGKLYLSGVTL CCEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEE HYV EEC >Mature Secondary Structure MKKSQWFWGTLFVLAAAVLVATQMGWTAFTLNPFSVVASVFLIAALVVSLVHLSIAGTIF CCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIAFLLMLYGKPLGISSLVPWTILLAAVLLTIGLSLIFHPYRRNWQKHALWKNFQHGFNH HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC HPDYDYTESTQSADDDVINIETSMSSGIHYIQSQDLKSINVNNYMGTTKVYFDQAHLEDS CCCCCCCCCCCCCCCCEEEEEECHHHCCHHHHCCCCCEECCCCCCCCEEEEEEHHHCCCC ATANINCQLGNITLYLPHDWNIVTDINSVMSGIDERGIRNSGTGPTLYIKGKLYLSGVTL CCEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEE HYV EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA