| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491934
Identifier: 116491934
GI number: 116491934
Start: 144335
End: 144580
Strand: Reverse
Name: 116491934
Synonym: PEPE_0120
Alternate gene names: NA
Gene position: 144580-144335 (Counterclockwise)
Preceding gene: 116491935
Following gene: 116491933
Centisome position: 7.89
GC content: 36.18
Gene sequence:
>246_bases ATGGAAAAATTAAGCGGAATTATTACTAGTGAAATTAAAAGTATCAGTTACTCTCCCATTTTATTTCGGTTTACCCTGAC GAATATGCAAGATCAGCACTACAACATGCTGATTCATACCCATGCTCTAAACTTTTTTCAACAAGCCAAGATGGGATCAG CTATTGAAGTATGGGCGGTCAAAAATAATCGCAATCAATACGTCATCCGACGTTTTAACGTCTTTGATTCGCATGTCTTA GTATAA
Upstream 100 bases:
>100_bases TTTAAATTAATGCCCACTTTGATTCCAAAATAGTCCGCTTGCTAATTGACAAAACGAACGTTTGTTCGTATAATTTACTT ATCAAAAAGAGGTCGATTAT
Downstream 100 bases:
>100_bases ATAGCTATCATAAAAACGCCATCCCTTCAGCAGGATGGCGTTTTTATTTACCTTCAGATTGGTTAATCCATCAAAAAATC CCCAGTGCTAGATTTTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MEKLSGIITSEIKSISYSPILFRFTLTNMQDQHYNMLIHTHALNFFQQAKMGSAIEVWAVKNNRNQYVIRRFNVFDSHVL V
Sequences:
>Translated_81_residues MEKLSGIITSEIKSISYSPILFRFTLTNMQDQHYNMLIHTHALNFFQQAKMGSAIEVWAVKNNRNQYVIRRFNVFDSHVL V >Mature_81_residues MEKLSGIITSEIKSISYSPILFRFTLTNMQDQHYNMLIHTHALNFFQQAKMGSAIEVWAVKNNRNQYVIRRFNVFDSHVL V
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9533; Mature: 9533
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLSGIITSEIKSISYSPILFRFTLTNMQDQHYNMLIHTHALNFFQQAKMGSAIEVWAV CCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEEEE KNNRNQYVIRRFNVFDSHVLV ECCCCEEEEEEECCCCCEECC >Mature Secondary Structure MEKLSGIITSEIKSISYSPILFRFTLTNMQDQHYNMLIHTHALNFFQQAKMGSAIEVWAV CCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEEEE KNNRNQYVIRRFNVFDSHVLV ECCCCEEEEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA