Click here to switch to the map view.

The map label for this gene is yisX [H]

Identifier: 116491851

GI number: 116491851

Start: 31114

End: 31752

Strand: Direct

Name: yisX [H]

Synonym: PEPE_0033

Alternate gene names: 116491851

Gene position: 31114-31752 (Clockwise)

Preceding gene: 116491850

Following gene: 116491853

Centisome position: 1.7

GC content: 33.8

Gene sequence:

>639_bases
GTGCAAAAACCTAAAATAGTTATTGATAATTTACCAGAGGAGTCATTTTTTGAGATTTACAAGGATGAAGACCGGATGCT
GATAAATCATCAAATTAGAAATCAAAATGCTGAAAAGCAATTCCTTGAACGGGGCATCATCGAACAATCTTACTTTGAAC
ACGTTAAGTTTAATCAAAGTGATTTTTATCGGCTAGAGTTAACCGACTCGATTTTTGTTGGCTGTGATTTTTCAAACTGT
AAAATGGAAGAAGCAGTTTTTTATCGATGTGAATTTAGAAATTGCAAGATGCTAGGGATCAACTTGAATGGCGCAATTTT
TAACAACGTTCTGTTAGATGGGACGAATATGCAGTTAGCAGCTCTAAATCAAATGAAAGTTAAAGATACAATGTTCAATG
CCTGCAATCTAAAAGATAGTAGTTTTGCTGAAAATAAACTACAAGGAGCAGTTCAATTTGAACATTGTGAAATTGACCAA
ATGTCCTTTTATGATACATCGCTGAAGCATGTTAATCTCAGTACATGTTTTTTTGAAAAAATTGATGTAGAAGAGCGTTT
AATTAGAGGAATGCAGGTCAATGCTACTCAAGCGGCCCAAATTGCGCAATATCTATTAGGTTTACGTGTAGAATATTAA

Upstream 100 bases:

>100_bases
CAAATTCCTAATATTACGTGGGTTTTTATTATAATGTTGATTGTTGGGATTATAGGAATTAAGATGACTGCAGGACATTA
AAACGGCGGAGGATGTAGGA

Downstream 100 bases:

>100_bases
AAAACTACGACTTTAGGTAATTTTCGAAGTGAATTTCGTACTTCGAAGGATTCATTACCTTTTGTCGTAGTTTATTTGTT
ATTATTATTATGTTCGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MQKPKIVIDNLPEESFFEIYKDEDRMLINHQIRNQNAEKQFLERGIIEQSYFEHVKFNQSDFYRLELTDSIFVGCDFSNC
KMEEAVFYRCEFRNCKMLGINLNGAIFNNVLLDGTNMQLAALNQMKVKDTMFNACNLKDSSFAENKLQGAVQFEHCEIDQ
MSFYDTSLKHVNLSTCFFEKIDVEERLIRGMQVNATQAAQIAQYLLGLRVEY

Sequences:

>Translated_212_residues
MQKPKIVIDNLPEESFFEIYKDEDRMLINHQIRNQNAEKQFLERGIIEQSYFEHVKFNQSDFYRLELTDSIFVGCDFSNC
KMEEAVFYRCEFRNCKMLGINLNGAIFNNVLLDGTNMQLAALNQMKVKDTMFNACNLKDSSFAENKLQGAVQFEHCEIDQ
MSFYDTSLKHVNLSTCFFEKIDVEERLIRGMQVNATQAAQIAQYLLGLRVEY
>Mature_212_residues
MQKPKIVIDNLPEESFFEIYKDEDRMLINHQIRNQNAEKQFLERGIIEQSYFEHVKFNQSDFYRLELTDSIFVGCDFSNC
KMEEAVFYRCEFRNCKMLGINLNGAIFNNVLLDGTNMQLAALNQMKVKDTMFNACNLKDSSFAENKLQGAVQFEHCEIDQ
MSFYDTSLKHVNLSTCFFEKIDVEERLIRGMQVNATQAAQIAQYLLGLRVEY

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646
- InterPro:   IPR012334 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 24802; Mature: 24802

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKPKIVIDNLPEESFFEIYKDEDRMLINHQIRNQNAEKQFLERGIIEQSYFEHVKFNQS
CCCCCEEEECCCCHHHHHHHCCCCEEEEEEHHCCCCHHHHHHHHCCHHHHHHHHHCCCCC
DFYRLELTDSIFVGCDFSNCKMEEAVFYRCEFRNCKMLGINLNGAIFNNVLLDGTNMQLA
CEEEEEECCEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEECCEEECCCCCEEE
ALNQMKVKDTMFNACNLKDSSFAENKLQGAVQFEHCEIDQMSFYDTSLKHVNLSTCFFEK
ECCCHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEHHHHHHH
IDVEERLIRGMQVNATQAAQIAQYLLGLRVEY
CCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQKPKIVIDNLPEESFFEIYKDEDRMLINHQIRNQNAEKQFLERGIIEQSYFEHVKFNQS
CCCCCEEEECCCCHHHHHHHCCCCEEEEEEHHCCCCHHHHHHHHCCHHHHHHHHHCCCCC
DFYRLELTDSIFVGCDFSNCKMEEAVFYRCEFRNCKMLGINLNGAIFNNVLLDGTNMQLA
CEEEEEECCEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEECCEEECCCCCEEE
ALNQMKVKDTMFNACNLKDSSFAENKLQGAVQFEHCEIDQMSFYDTSLKHVNLSTCFFEK
ECCCHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEHHHHHHH
IDVEERLIRGMQVNATQAAQIAQYLLGLRVEY
CCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]