| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491839
Identifier: 116491839
GI number: 116491839
Start: 21867
End: 23051
Strand: Reverse
Name: 116491839
Synonym: PEPE_0021
Alternate gene names: NA
Gene position: 23051-21867 (Counterclockwise)
Preceding gene: 116491840
Following gene: 116491832
Centisome position: 1.26
GC content: 38.48
Gene sequence:
>1185_bases ATGGATAAATTAGAACAGTTAACCCAAAAAGATTTGGAAGAATTTTATCAACTATACCTGTACGCCTTTACGAACTTAGA TTCAAACGGACGACGAGCTTTCTTTGACCATCGCTACAACCATGCTTTAAAATATGGAATCAAACATAATGGAAAACTCG GAAGCGGGATGTTAAGTATTCCATTTCACGTTAACTTTCATGGTGTGAAATACAAGATGAATGGGATTGGCGATGTCATG AGTTATCCCGAATACGGCGGTAACGGAGCAATTACCCAACTCATGCAACAAGCTTTTAACGATATGTTAGAAGACAACGT TGCTCTCTCATATCTTGCTCCATTTTCATACGATTTCTATCGTCGTTTTGGGTATGAAGAAGTTTTTGATCGTACCATCT ATCGGGTTAAAAACACCGACTTACCGAGAGTAAAGATTGACAAAAAGATTGGTAGTATTGAACGTTTAACCTTAGCCGAA GCTATTCCATTTATTAAGGAAGTTTATGCTAATAATCCCAACAGCCACAATGCTGGTTTAATTCGTGAGGATTGGTGGTG GGATTATCTCGTTCTCAAGCATCCTCATTGGCAGGTGGGCGTCTACTTCTCTGAAGACCATTTATCTGCGGGGTACGTTA TCTACGAGGGGCTTGATACTACCTTCTCGATTCAAGAAATCATGTTTACTAATTGGGAAAGTTTCCAGTATCTAAGTCGC TTTGTCTGCCAACATGAGTCGATGTTTTCAACTTTCGAATACGCCAGTGGTGACCCTTTAGGCCATCCTGACATTCTAAA GAATCCATCCAATGTTGAAGTTCAGATTAAGCCTTACATGATGGCTCGCATTATTAACCTTGAAACCTTCATTAATCACT ATCCATTCTTAAAGAAAATCAAAAGCACTCGTGTTGCAGTTGCTGATAAAATGCTTCCGGCTAATAACGGAATTTGGCGT CTTTTAATCAATGCCAATGGCACTAGCTTTGAGAAAATTAGTGATAACGAAAATAATATGGCTGACATTCGTATATCTAT TCAAGAACTCACTAAAGTTTTATTAGGTTATCGTTCCTTAAATGAACTTAATCGAATTGGAGCGATTCGCGGTAGCTATG AGGCTATCACAAATTTAGATGCTACCTTACGTAAAGAACCACCTATGCTATGGGATTACTTTTAA
Upstream 100 bases:
>100_bases CTAATCGAGTAGTTGAAATCGCTGGTATAATAGTATTTGTAGTACTAGGAGCACTTCTAAAACGAAAAGCAGTTAATAAA AATTAATGAGGCCCAACGAC
Downstream 100 bases:
>100_bases ATCAAACTTTAAAAAGGCAAACCAACGTCAGTTGATTTGCCTTTTTATCATTTTTCAGTATAGATAGAACGGAGATTATA TCTAATATATTTTTCAAAAA
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase Gnat Family; Eis Acetyltransferase-Like Acetyltransferase; Gcn5-Like N-Acetyltransferase; Acetyltransferase Involved In Intracellular Survival; Acetyltransferase Eis Type
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MDKLEQLTQKDLEEFYQLYLYAFTNLDSNGRRAFFDHRYNHALKYGIKHNGKLGSGMLSIPFHVNFHGVKYKMNGIGDVM SYPEYGGNGAITQLMQQAFNDMLEDNVALSYLAPFSYDFYRRFGYEEVFDRTIYRVKNTDLPRVKIDKKIGSIERLTLAE AIPFIKEVYANNPNSHNAGLIREDWWWDYLVLKHPHWQVGVYFSEDHLSAGYVIYEGLDTTFSIQEIMFTNWESFQYLSR FVCQHESMFSTFEYASGDPLGHPDILKNPSNVEVQIKPYMMARIINLETFINHYPFLKKIKSTRVAVADKMLPANNGIWR LLINANGTSFEKISDNENNMADIRISIQELTKVLLGYRSLNELNRIGAIRGSYEAITNLDATLRKEPPMLWDYF
Sequences:
>Translated_394_residues MDKLEQLTQKDLEEFYQLYLYAFTNLDSNGRRAFFDHRYNHALKYGIKHNGKLGSGMLSIPFHVNFHGVKYKMNGIGDVM SYPEYGGNGAITQLMQQAFNDMLEDNVALSYLAPFSYDFYRRFGYEEVFDRTIYRVKNTDLPRVKIDKKIGSIERLTLAE AIPFIKEVYANNPNSHNAGLIREDWWWDYLVLKHPHWQVGVYFSEDHLSAGYVIYEGLDTTFSIQEIMFTNWESFQYLSR FVCQHESMFSTFEYASGDPLGHPDILKNPSNVEVQIKPYMMARIINLETFINHYPFLKKIKSTRVAVADKMLPANNGIWR LLINANGTSFEKISDNENNMADIRISIQELTKVLLGYRSLNELNRIGAIRGSYEAITNLDATLRKEPPMLWDYF >Mature_394_residues MDKLEQLTQKDLEEFYQLYLYAFTNLDSNGRRAFFDHRYNHALKYGIKHNGKLGSGMLSIPFHVNFHGVKYKMNGIGDVM SYPEYGGNGAITQLMQQAFNDMLEDNVALSYLAPFSYDFYRRFGYEEVFDRTIYRVKNTDLPRVKIDKKIGSIERLTLAE AIPFIKEVYANNPNSHNAGLIREDWWWDYLVLKHPHWQVGVYFSEDHLSAGYVIYEGLDTTFSIQEIMFTNWESFQYLSR FVCQHESMFSTFEYASGDPLGHPDILKNPSNVEVQIKPYMMARIINLETFINHYPFLKKIKSTRVAVADKMLPANNGIWR LLINANGTSFEKISDNENNMADIRISIQELTKVLLGYRSLNELNRIGAIRGSYEAITNLDATLRKEPPMLWDYF
Specific function: Unknown
COG id: COG4552
COG function: function code R; Predicted acetyltransferase involved in intracellular survival and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45898; Mature: 45898
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLEQLTQKDLEEFYQLYLYAFTNLDSNGRRAFFDHRYNHALKYGIKHNGKLGSGMLSI CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHEECCCCCCCCCCCEEEC PFHVNFHGVKYKMNGIGDVMSYPEYGGNGAITQLMQQAFNDMLEDNVALSYLAPFSYDFY CEEEEEEEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH RRFGYEEVFDRTIYRVKNTDLPRVKIDKKIGSIERLTLAEAIPFIKEVYANNPNSHNAGL HHCCHHHHHHHHHHHCCCCCCCCEEECCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC IREDWWWDYLVLKHPHWQVGVYFSEDHLSAGYVIYEGLDTTFSIQEIMFTNWESFQYLSR EECCCCEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCCEEHHHHHHCCCHHHHHHHH FVCQHESMFSTFEYASGDPLGHPDILKNPSNVEVQIKPYMMARIINLETFINHYPFLKKI HHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCHHHHHH KSTRVAVADKMLPANNGIWRLLINANGTSFEKISDNENNMADIRISIQELTKVLLGYRSL HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHH NELNRIGAIRGSYEAITNLDATLRKEPPMLWDYF HHHHHHHCCCCCHHHHHCCCHHHHCCCCCCCCCC >Mature Secondary Structure MDKLEQLTQKDLEEFYQLYLYAFTNLDSNGRRAFFDHRYNHALKYGIKHNGKLGSGMLSI CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHEECCCCCCCCCCCEEEC PFHVNFHGVKYKMNGIGDVMSYPEYGGNGAITQLMQQAFNDMLEDNVALSYLAPFSYDFY CEEEEEEEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH RRFGYEEVFDRTIYRVKNTDLPRVKIDKKIGSIERLTLAEAIPFIKEVYANNPNSHNAGL HHCCHHHHHHHHHHHCCCCCCCCEEECCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC IREDWWWDYLVLKHPHWQVGVYFSEDHLSAGYVIYEGLDTTFSIQEIMFTNWESFQYLSR EECCCCEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCCEEHHHHHHCCCHHHHHHHH FVCQHESMFSTFEYASGDPLGHPDILKNPSNVEVQIKPYMMARIINLETFINHYPFLKKI HHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCHHHHHH KSTRVAVADKMLPANNGIWRLLINANGTSFEKISDNENNMADIRISIQELTKVLLGYRSL HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHH NELNRIGAIRGSYEAITNLDATLRKEPPMLWDYF HHHHHHHCCCCCHHHHHCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA