| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is 116491840
Identifier: 116491840
GI number: 116491840
Start: 23066
End: 23251
Strand: Reverse
Name: 116491840
Synonym: PEPE_0022
Alternate gene names: NA
Gene position: 23251-23066 (Counterclockwise)
Preceding gene: 116491841
Following gene: 116491839
Centisome position: 1.27
GC content: 32.26
Gene sequence:
>186_bases ATGAAAATCAAAATTCTATTAAAATATAGTGTAGTAGGTGCGATCTTGATTGCAGCTCTTGCTATTGCGATGACCCAACT TCATTTAACTTCAACCCTAACTAATCGAGTAGTTGAAATCGCTGGTATAATAGTATTTGTAGTACTAGGAGCACTTCTAA AACGAAAAGCAGTTAATAAAAATTAA
Upstream 100 bases:
>100_bases AGCAATTGAACTAGTCATTGCCGGAGCAATCTACTATCCCTTCTTCAAAGTGGCTGAAAAACAAATGGTTGCCCAAGAAG CAAGTGAGGCTTAATCTTTC
Downstream 100 bases:
>100_bases TGAGGCCCAACGACATGGATAAATTAGAACAGTTAACCCAAAAAGATTTGGAAGAATTTTATCAACTATACCTGTACGCC TTTACGAACTTAGATTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MKIKILLKYSVVGAILIAALAIAMTQLHLTSTLTNRVVEIAGIIVFVVLGALLKRKAVNKN
Sequences:
>Translated_61_residues MKIKILLKYSVVGAILIAALAIAMTQLHLTSTLTNRVVEIAGIIVFVVLGALLKRKAVNKN >Mature_61_residues MKIKILLKYSVVGAILIAALAIAMTQLHLTSTLTNRVVEIAGIIVFVVLGALLKRKAVNKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6557; Mature: 6557
Theoretical pI: Translated: 11.44; Mature: 11.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKILLKYSVVGAILIAALAIAMTQLHLTSTLTNRVVEIAGIIVFVVLGALLKRKAVNK CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC N C >Mature Secondary Structure MKIKILLKYSVVGAILIAALAIAMTQLHLTSTLTNRVVEIAGIIVFVVLGALLKRKAVNK CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA