Click here to switch to the map view.

The map label for this gene is ypaA [H]

Identifier: 116491832

GI number: 116491832

Start: 15587

End: 15955

Strand: Reverse

Name: ypaA [H]

Synonym: PEPE_0014

Alternate gene names: 116491832

Gene position: 15955-15587 (Counterclockwise)

Preceding gene: 116491839

Following gene: NA

Centisome position: 0.87

GC content: 39.3

Gene sequence:

>369_bases
TTGCATATATTAACAGTTATCTTAGTTGCACTCGTAGCCATTGAGCATATTGGCATCATGGGCATTGAATTATTGGGTTC
TAGTGCATTTCTTGCCAAAACCTTTGAAATTCCCTTAGTGGAAGTTCAACGCCCTCATTTACGAACGGCGTTAGCCAATC
AAGGTCTTTATAACGGCTTCGTGGCCTTAGCCCTCTTCTTGGCACTCTTTATTCCAACAGGAACTATTATGAAGATGATG
CTCATCTTTTTCCTAGCAAGCATTTTTATCTTAGCAGCATACGGTGCTCTCACCGTCGCCAAAAAGATTCTTTTAGTCCA
AGGTTTACCTGCCTTGATTACTTTGATTTTGGTATTATTTATTTTCTAA

Upstream 100 bases:

>100_bases
ATTGAAGTTCATTTTTTGCTTCAAACTCCATTGCTGAACTTCAATTTAATCAAAAAAGATACGGATGCGTTATAATGGTG
GACACAAGGAGTTGAATATT

Downstream 100 bases:

>100_bases
ATAAAAAAGGATAGCCTTAGAGGCTATCCTTTTTTATTAGATTCGTATAAAATTGCTTTCCGTTTAGTGCCTTCAATAAT
GAACGCAATGACTACTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MHILTVILVALVAIEHIGIMGIELLGSSAFLAKTFEIPLVEVQRPHLRTALANQGLYNGFVALALFLALFIPTGTIMKMM
LIFFLASIFILAAYGALTVAKKILLVQGLPALITLILVLFIF

Sequences:

>Translated_122_residues
MHILTVILVALVAIEHIGIMGIELLGSSAFLAKTFEIPLVEVQRPHLRTALANQGLYNGFVALALFLALFIPTGTIMKMM
LIFFLASIFILAAYGALTVAKKILLVQGLPALITLILVLFIF
>Mature_122_residues
MHILTVILVALVAIEHIGIMGIELLGSSAFLAKTFEIPLVEVQRPHLRTALANQGLYNGFVALALFLALFIPTGTIMKMM
LIFFLASIFILAAYGALTVAKKILLVQGLPALITLILVLFIF

Specific function: Unknown

COG id: COG3759

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009732 [H]

Pfam domain/function: PF06993 DUF1304 [H]

EC number: NA

Molecular weight: Translated: 13250; Mature: 13250

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILTVILVALVAIEHIGIMGIELLGSSAFLAKTFEIPLVEVQRPHLRTALANQGLYNGF
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCHHHHHHHHHCCHHHHH
VALALFLALFIPTGTIMKMMLIFFLASIFILAAYGALTVAKKILLVQGLPALITLILVLF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IF
HC
>Mature Secondary Structure
MHILTVILVALVAIEHIGIMGIELLGSSAFLAKTFEIPLVEVQRPHLRTALANQGLYNGF
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCHHHHHHHHHCCHHHHH
VALALFLALFIPTGTIMKMMLIFFLASIFILAAYGALTVAKKILLVQGLPALITLILVLF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IF
HC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400208; 11337471 [H]