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The map label for this gene is fliP [H]

Identifier: 116514991

GI number: 116514991

Start: 55416

End: 56150

Strand: Direct

Name: fliP [H]

Synonym: BCc_048

Alternate gene names: 116514991

Gene position: 55416-56150 (Clockwise)

Preceding gene: 116514990

Following gene: 116514992

Centisome position: 13.31

GC content: 20.95

Gene sequence:

>735_bases
ATGATATATAATTGGAATAATTTTTTTTTGTTTTTTCCTTCAGTTTTTTTATTTGAAAAATTTTCTAATAACAAAATATG
TTCTTTTATTCCAGATGAATTTAATTTATTAAATTTTTCTGTTAAATCTTCAGCAATATTAACTATAATAAGTTTTCTTC
CTGCATGTATATTAATGATGACTTGTTTTACTAGAATTATTATTGTATTAAGTTTGCTAAGAACTGCATTAGGAGTACCA
TATTCCCCTCCTAATCAAATATTAATTGGATTATCTTTATTTTTAACTTTTTTCATTATGTCTCCAACATTAAATAAAAT
TTATAATACAGCTTTAATTCCTTTATATAAACATGAAATTAATACAGAAGTCGCATTAAAAAAAATTATTAAACCTATAC
ATATATTTATGTTAAAACAAACTAGAAAATCTGATATTTCTGTATTTTGGAAATTAGCTAAAATTTCTTTTCCTATGAAA
AAAGATAATATTCCTTTTTATATTTTATTACCTTCATTTATAATTAGTGAATTGAAAACTGCTTTTCAAATTGGTTTCAC
TGTTTTATTACCATTTTTAATTATTGATTTAGTAATTGCTAGTATTTTGATGTCTTTAGGAATAATGATGATTTCTCCTT
CAACTATTTCTTTACCATTAAAATTAATATTATTTGTTTTATCAGATGGTTGGAAATTGTTAGTTGTATCTCTTGCAAAA
AGTTTTTTTATTTAA

Upstream 100 bases:

>100_bases
AAAATATTATTATAATTATTTATTATATATATTTTAAAAATATATTAGTGTTTTTTTTTGTTATTTTTAATGTTTTTTAA
ATAAATTTAGGTGAATAATA

Downstream 100 bases:

>100_bases
AGTTTAATTTAAACTATATTAATCATTAAAGGTTTTATTATGAATCAAGAATTTTTAATTACATTATTTCAAGATTCTAT
TAAATTTGTTTTTTTAATAT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MIYNWNNFFLFFPSVFLFEKFSNNKICSFIPDEFNLLNFSVKSSAILTIISFLPACILMMTCFTRIIIVLSLLRTALGVP
YSPPNQILIGLSLFLTFFIMSPTLNKIYNTALIPLYKHEINTEVALKKIIKPIHIFMLKQTRKSDISVFWKLAKISFPMK
KDNIPFYILLPSFIISELKTAFQIGFTVLLPFLIIDLVIASILMSLGIMMISPSTISLPLKLILFVLSDGWKLLVVSLAK
SFFI

Sequences:

>Translated_244_residues
MIYNWNNFFLFFPSVFLFEKFSNNKICSFIPDEFNLLNFSVKSSAILTIISFLPACILMMTCFTRIIIVLSLLRTALGVP
YSPPNQILIGLSLFLTFFIMSPTLNKIYNTALIPLYKHEINTEVALKKIIKPIHIFMLKQTRKSDISVFWKLAKISFPMK
KDNIPFYILLPSFIISELKTAFQIGFTVLLPFLIIDLVIASILMSLGIMMISPSTISLPLKLILFVLSDGWKLLVVSLAK
SFFI
>Mature_244_residues
MIYNWNNFFLFFPSVFLFEKFSNNKICSFIPDEFNLLNFSVKSSAILTIISFLPACILMMTCFTRIIIVLSLLRTALGVP
YSPPNQILIGLSLFLTFFIMSPTLNKIYNTALIPLYKHEINTEVALKKIIKPIHIFMLKQTRKSDISVFWKLAKISFPMK
KDNIPFYILLPSFIISELKTAFQIGFTVLLPFLIIDLVIASILMSLGIMMISPSTISLPLKLILFVLSDGWKLLVVSLAK
SFFI

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=214, Percent_Identity=54.6728971962617, Blast_Score=239, Evalue=1e-64,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022781
- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF04347 FliO; PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27883; Mature: 27883

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS01060 FLIP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYNWNNFFLFFPSVFLFEKFSNNKICSFIPDEFNLLNFSVKSSAILTIISFLPACILMM
CEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
TCFTRIIIVLSLLRTALGVPYSPPNQILIGLSLFLTFFIMSPTLNKIYNTALIPLYKHEI
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NTEVALKKIIKPIHIFMLKQTRKSDISVFWKLAKISFPMKKDNIPFYILLPSFIISELKT
CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHH
AFQIGFTVLLPFLIIDLVIASILMSLGIMMISPSTISLPLKLILFVLSDGWKLLVVSLAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
SFFI
HHCC
>Mature Secondary Structure
MIYNWNNFFLFFPSVFLFEKFSNNKICSFIPDEFNLLNFSVKSSAILTIISFLPACILMM
CEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
TCFTRIIIVLSLLRTALGVPYSPPNQILIGLSLFLTFFIMSPTLNKIYNTALIPLYKHEI
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NTEVALKKIIKPIHIFMLKQTRKSDISVFWKLAKISFPMKKDNIPFYILLPSFIISELKT
CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHH
AFQIGFTVLLPFLIIDLVIASILMSLGIMMISPSTISLPLKLILFVLSDGWKLLVVSLAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
SFFI
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]