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The map label for this gene is fliQ [H]

Identifier: 116514992

GI number: 116514992

Start: 56190

End: 56456

Strand: Direct

Name: fliQ [H]

Synonym: BCc_049

Alternate gene names: 116514992

Gene position: 56190-56456 (Clockwise)

Preceding gene: 116514991

Following gene: 116514993

Centisome position: 13.49

GC content: 19.48

Gene sequence:

>267_bases
ATGAATCAAGAATTTTTAATTACATTATTTCAAGATTCTATTAAATTTGTTTTTTTAATATCAGTACCATGTTTAATACC
AATCTTATTAATTGGTATTTTAATTAGTTTTTTACAATCAATTACACAAATTCATGAACAAACATTATCATTTATACCAA
AAATTTTATCTATTTTTCTTTCTCTCATTTTTTTTGGACCATGGATGTTACAGTTGACTATTCAATATATAAGAAATATT
TTTTATATAATATCAACGGTTAATTAA

Upstream 100 bases:

>100_bases
TGTTTTATCAGATGGTTGGAAATTGTTAGTTGTATCTCTTGCAAAAAGTTTTTTTATTTAAAGTTTAATTTAAACTATAT
TAATCATTAAAGGTTTTATT

Downstream 100 bases:

>100_bases
TCATTATGATAAATAATTTATTCAATAAATTTTATTTTTTAATTAATAATAATATTATTTTCATCATGGCTCGTGTTTTT
TCGTTATTGTTTTATTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MNQEFLITLFQDSIKFVFLISVPCLIPILLIGILISFLQSITQIHEQTLSFIPKILSIFLSLIFFGPWMLQLTIQYIRNI
FYIISTVN

Sequences:

>Translated_88_residues
MNQEFLITLFQDSIKFVFLISVPCLIPILLIGILISFLQSITQIHEQTLSFIPKILSIFLSLIFFGPWMLQLTIQYIRNI
FYIISTVN
>Mature_88_residues
MNQEFLITLFQDSIKFVFLISVPCLIPILLIGILISFLQSITQIHEQTLSFIPKILSIFLSLIFFGPWMLQLTIQYIRNI
FYIISTVN

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 10267; Mature: 10267

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQEFLITLFQDSIKFVFLISVPCLIPILLIGILISFLQSITQIHEQTLSFIPKILSIFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLIFFGPWMLQLTIQYIRNIFYIISTVN
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQEFLITLFQDSIKFVFLISVPCLIPILLIGILISFLQSITQIHEQTLSFIPKILSIFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLIFFGPWMLQLTIQYIRNIFYIISTVN
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]