| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328080
Identifier: 116328080
GI number: 116328080
Start: 1609875
End: 1611089
Strand: Direct
Name: 116328080
Synonym: LBL_1377
Alternate gene names: NA
Gene position: 1609875-1611089 (Clockwise)
Preceding gene: 116328079
Following gene: 116328081
Centisome position: 44.54
GC content: 39.34
Gene sequence:
>1215_bases ATGATTTCCCATCTTCCGAGCGGCATTCGAGTAGAGTTCTTAGATTCTATTTCCTTAATTTCTAAACAAGAGTGGAATTT TATTTCCGATCCCAAAAGTCCTTTTTTAGAGTATGATTTTCTCAAATCTTTGGAAGTTTCTTGTTGTATCGGACCTTCCA CTTCTTGGATTCAGAGATATTGTGTACTTTGGATAGAAGACCGTCTTTCGGCCGTAATTCCTCTCTTTCTGAAATTCGAT TCGTACGGTGAATACATCTTTGATTTTCAATGGGCTCAGTTTTTCTTACAAGCCGGACTCAAATACTATCCGAAAGGTCT TGTTGCAATTCCATTTACTCCTGCCAACGGAAAAAGGATCTTATACGATGCTCGTTTGAGTTTAAAAGAAGTCTGTTCTT ATCTGATTCCGGAACTCCTTCAGTTTTGTGAAAAAGAGGGTTTATCCGGGGTTCATTTTTTATTTCTAGAGAAAGAAGAA TCCGAGATTCTTTCCGAATACGGATTTGCAACGAGGCTTTCCCACCAGTATCATTGGATCAATGGAGGGTATTCGAGTTT TGACGATTATCTCCAGGCGATGAAATCCAAGAAGAGAATGCAGATCAAACGGGAAAGAGAGATCGTTCGTAGTTATGGAC TTAAGATTCGGGTTCTGGAAGGAGATGGAATTTCTCGTTCGGACATGGATGCGATCTGGAATTTTTATTTGGACACCCAT TCTCGCAAATGGGGTTCTGCGTATTTAAATCGAAAGTTCTTCGATTCTTCTTTTGAAAATTTTTTGGATAGGATTGTTCT TGTTCTTGCATATAGAGAAGAAAAACCGGTCGCGGGTACTTTCAATCTTAGAAAGGGCGACTTTCTCTACGGAAGATATT GGGATTGTACGGAATACTACCCTCGTCTTCACTTTGAATGTTGTTTTTATCAATTGATCGAGTATGCGATTCGAGAAAAC ATCAAAGTTTTCGAAGCGGGGGCGCAAGGTGAGCATAAATTTTTAAGAGGTTTTCCGGCGGTTCCTACGTATAGTTCTCA TCGGATTTTTCATGCTGGAGCTAGAAATGCGATTGAACGTTTTTTAAAGGAAGAAAAATTGCAAATGCAGGAAATGATCC AAGAAACCAATGAACATTCTCCGTTGAAAAAAACGCAAACGAATGTCTACTTCAAAACGGAAACAACTTCGAACTTAGGG AGTTACGAACCGTGA
Upstream 100 bases:
>100_bases CAATGTCAAGGTCATTACTCATCGAGCGATTCAAAAGATTAGAAAGCATTTTTCACTCGATCTCTGACAAAATAGCGGTC AAGATCGTCCAAGAATTAAC
Downstream 100 bases:
>100_bases GTGATATCTTTCGATTTGATACCGAAGAACAAACTCTCACTAAAGAGAAGGTAAAACTCAAACGTCCTTCCAAATACAGA GTTATCATACTCAACGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MISHLPSGIRVEFLDSISLISKQEWNFISDPKSPFLEYDFLKSLEVSCCIGPSTSWIQRYCVLWIEDRLSAVIPLFLKFD SYGEYIFDFQWAQFFLQAGLKYYPKGLVAIPFTPANGKRILYDARLSLKEVCSYLIPELLQFCEKEGLSGVHFLFLEKEE SEILSEYGFATRLSHQYHWINGGYSSFDDYLQAMKSKKRMQIKREREIVRSYGLKIRVLEGDGISRSDMDAIWNFYLDTH SRKWGSAYLNRKFFDSSFENFLDRIVLVLAYREEKPVAGTFNLRKGDFLYGRYWDCTEYYPRLHFECCFYQLIEYAIREN IKVFEAGAQGEHKFLRGFPAVPTYSSHRIFHAGARNAIERFLKEEKLQMQEMIQETNEHSPLKKTQTNVYFKTETTSNLG SYEP
Sequences:
>Translated_404_residues MISHLPSGIRVEFLDSISLISKQEWNFISDPKSPFLEYDFLKSLEVSCCIGPSTSWIQRYCVLWIEDRLSAVIPLFLKFD SYGEYIFDFQWAQFFLQAGLKYYPKGLVAIPFTPANGKRILYDARLSLKEVCSYLIPELLQFCEKEGLSGVHFLFLEKEE SEILSEYGFATRLSHQYHWINGGYSSFDDYLQAMKSKKRMQIKREREIVRSYGLKIRVLEGDGISRSDMDAIWNFYLDTH SRKWGSAYLNRKFFDSSFENFLDRIVLVLAYREEKPVAGTFNLRKGDFLYGRYWDCTEYYPRLHFECCFYQLIEYAIREN IKVFEAGAQGEHKFLRGFPAVPTYSSHRIFHAGARNAIERFLKEEKLQMQEMIQETNEHSPLKKTQTNVYFKTETTSNLG SYEP >Mature_404_residues MISHLPSGIRVEFLDSISLISKQEWNFISDPKSPFLEYDFLKSLEVSCCIGPSTSWIQRYCVLWIEDRLSAVIPLFLKFD SYGEYIFDFQWAQFFLQAGLKYYPKGLVAIPFTPANGKRILYDARLSLKEVCSYLIPELLQFCEKEGLSGVHFLFLEKEE SEILSEYGFATRLSHQYHWINGGYSSFDDYLQAMKSKKRMQIKREREIVRSYGLKIRVLEGDGISRSDMDAIWNFYLDTH SRKWGSAYLNRKFFDSSFENFLDRIVLVLAYREEKPVAGTFNLRKGDFLYGRYWDCTEYYPRLHFECCFYQLIEYAIREN IKVFEAGAQGEHKFLRGFPAVPTYSSHRIFHAGARNAIERFLKEEKLQMQEMIQETNEHSPLKKTQTNVYFKTETTSNLG SYEP
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47558; Mature: 47558
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISHLPSGIRVEFLDSISLISKQEWNFISDPKSPFLEYDFLKSLEVSCCIGPSTSWIQRY CCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCHHHHHHH CVLWIEDRLSAVIPLFLKFDSYGEYIFDFQWAQFFLQAGLKYYPKGLVAIPFTPANGKRI HHHHHHHHHHHHHHHHHEECCCCCCEEHHHHHHHHHHHCHHHCCCCEEEEEEECCCCCEE LYDARLSLKEVCSYLIPELLQFCEKEGLSGVHFLFLEKEESEILSEYGFATRLSHQYHWI EEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHCCCHHHHCCCEEEE NGGYSSFDDYLQAMKSKKRMQIKREREIVRSYGLKIRVLEGDGISRSDMDAIWNFYLDTH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCC SRKWGSAYLNRKFFDSSFENFLDRIVLVLAYREEKPVAGTFNLRKGDFLYGRYWDCTEYY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEECCCCHHHHH PRLHFECCFYQLIEYAIRENIKVFEAGAQGEHKFLRGFPAVPTYSSHRIFHAGARNAIER HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCCCCCEEEECHHHHHHHH FLKEEKLQMQEMIQETNEHSPLKKTQTNVYFKTETTSNLGSYEP HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MISHLPSGIRVEFLDSISLISKQEWNFISDPKSPFLEYDFLKSLEVSCCIGPSTSWIQRY CCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCHHHHHHH CVLWIEDRLSAVIPLFLKFDSYGEYIFDFQWAQFFLQAGLKYYPKGLVAIPFTPANGKRI HHHHHHHHHHHHHHHHHEECCCCCCEEHHHHHHHHHHHCHHHCCCCEEEEEEECCCCCEE LYDARLSLKEVCSYLIPELLQFCEKEGLSGVHFLFLEKEESEILSEYGFATRLSHQYHWI EEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHCCCHHHHCCCEEEE NGGYSSFDDYLQAMKSKKRMQIKREREIVRSYGLKIRVLEGDGISRSDMDAIWNFYLDTH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCC SRKWGSAYLNRKFFDSSFENFLDRIVLVLAYREEKPVAGTFNLRKGDFLYGRYWDCTEYY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEECCCCHHHHH PRLHFECCFYQLIEYAIRENIKVFEAGAQGEHKFLRGFPAVPTYSSHRIFHAGARNAIER HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCCCCCEEEECHHHHHHHH FLKEEKLQMQEMIQETNEHSPLKKTQTNVYFKTETTSNLGSYEP HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA