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The map label for this gene is yrrI [H]

Identifier: 116327615

GI number: 116327615

Start: 982776

End: 983843

Strand: Direct

Name: yrrI [H]

Synonym: LBL_0847

Alternate gene names: 116327615

Gene position: 982776-983843 (Clockwise)

Preceding gene: 116327614

Following gene: 116327616

Centisome position: 27.19

GC content: 41.76

Gene sequence:

>1068_bases
ATGCGTGATCCGGAAATCAGGGAATTTTCCGGATACTTCATTCGGACGAGTTTTTTTCTTATTGTTGTTTTTACGACCGT
CGTTTCTCTTTGGGGACTTCAATTACTTGCAGTTCCGATCGTGTTGGCTCTTCTGATCTTCTATACGTTTAATGGAATGA
TCAACGATCTGGAAAGTTTAGGTGTGCCTAGAATTCTTTCCATTGCAATTTTGATGTTGTTCACTAGTATTCCGATTTAT
CTTTTCATCAATTCAGTCGCTTCTCCGATCGCTTCCACGTTAAATCCGCTTTTGAAAAACTGGAAACAGGATCTGGACGA
TGCAAAGTTCAAATATTTGACCGTAACTGTCAATCTTCAGTTCAATGAATTTCCCGCTTCTTGGAACGAAACAATTCGTC
CCGACGAACTGATTAAGAAGATCGCGGAGCTGATGCACGAACAAGTGAAAGGGTTCGTATCTTATATTCCGACTTTGATC
GGTTATCTACTTATTACTCCTTTGTTTGCGTTTTTATTTTTACTAAACGGAAACGGAATCTATAAAAGTCTGATCTCCCT
GATACCGAATCGTTATTTTGAAATGGCCCTCATGATCACGTATAAGATCAACGAACAACTTACAAATTATCTTAAAAGTC
TAATGATTCAAAGTATGATCATCTGTGCGGTTTCCAGCTTGGGATTTTATATCATAGGATTGCCTTACTTTTACATTTTC
GGTCTCTTTTTGGGAATCGCGAACTCGATTCCTTATCTAGGTCCGATCATGGGGGCGATTCCACCTTTGTTTTTTGCCCT
CGTAATCGGCGGGGCCGGAACGACGGGACTGATGATTTCGATTTTGATCGTGGTATCGATCGCACAGATTATCGATAACT
TCTTAGTGCAGCCGGTCGTAATTTCAGGTTCGATGTCTCTTCATCCGATCGTAATCGTAGGTGCGGTTACCGTGGGAGGG
GCTGCGCTTGGTCTTGTGGGAATGCTCATCGCGGTCCCGATGGCGGCGATCTTAAAAGTGACGATTCAAACTCTTTATAG
TTCGATGAAGGATCATAATCTGCTTTGA

Upstream 100 bases:

>100_bases
GGCATTGAAATTCTCATGAGTCTTTCTACGGTGATCGTAGAAAGACTACATAGAACCAACGGGCTTTTAGAAAAAGCCTA
CTTCAAAGGAAAACAAAAAA

Downstream 100 bases:

>100_bases
TCGCCGCCTGAATTTTAAGACGATGAATCAGGATTTTGGAACGATGCGATTTTATGAGTTTAGCATTAGGCGAAATTCCG
GCTTGAACTTGCATTAACTG

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MRDPEIREFSGYFIRTSFFLIVVFTTVVSLWGLQLLAVPIVLALLIFYTFNGMINDLESLGVPRILSIAILMLFTSIPIY
LFINSVASPIASTLNPLLKNWKQDLDDAKFKYLTVTVNLQFNEFPASWNETIRPDELIKKIAELMHEQVKGFVSYIPTLI
GYLLITPLFAFLFLLNGNGIYKSLISLIPNRYFEMALMITYKINEQLTNYLKSLMIQSMIICAVSSLGFYIIGLPYFYIF
GLFLGIANSIPYLGPIMGAIPPLFFALVIGGAGTTGLMISILIVVSIAQIIDNFLVQPVVISGSMSLHPIVIVGAVTVGG
AALGLVGMLIAVPMAAILKVTIQTLYSSMKDHNLL

Sequences:

>Translated_355_residues
MRDPEIREFSGYFIRTSFFLIVVFTTVVSLWGLQLLAVPIVLALLIFYTFNGMINDLESLGVPRILSIAILMLFTSIPIY
LFINSVASPIASTLNPLLKNWKQDLDDAKFKYLTVTVNLQFNEFPASWNETIRPDELIKKIAELMHEQVKGFVSYIPTLI
GYLLITPLFAFLFLLNGNGIYKSLISLIPNRYFEMALMITYKINEQLTNYLKSLMIQSMIICAVSSLGFYIIGLPYFYIF
GLFLGIANSIPYLGPIMGAIPPLFFALVIGGAGTTGLMISILIVVSIAQIIDNFLVQPVVISGSMSLHPIVIVGAVTVGG
AALGLVGMLIAVPMAAILKVTIQTLYSSMKDHNLL
>Mature_355_residues
MRDPEIREFSGYFIRTSFFLIVVFTTVVSLWGLQLLAVPIVLALLIFYTFNGMINDLESLGVPRILSIAILMLFTSIPIY
LFINSVASPIASTLNPLLKNWKQDLDDAKFKYLTVTVNLQFNEFPASWNETIRPDELIKKIAELMHEQVKGFVSYIPTLI
GYLLITPLFAFLFLLNGNGIYKSLISLIPNRYFEMALMITYKINEQLTNYLKSLMIQSMIICAVSSLGFYIIGLPYFYIF
GLFLGIANSIPYLGPIMGAIPPLFFALVIGGAGTTGLMISILIVVSIAQIIDNFLVQPVVISGSMSLHPIVIVGAVTVGG
AALGLVGMLIAVPMAAILKVTIQTLYSSMKDHNLL

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=187, Percent_Identity=30.4812834224599, Blast_Score=88, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39243; Mature: 39243

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDPEIREFSGYFIRTSFFLIVVFTTVVSLWGLQLLAVPIVLALLIFYTFNGMINDLESL
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVPRILSIAILMLFTSIPIYLFINSVASPIASTLNPLLKNWKQDLDDAKFKYLTVTVNLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE
FNEFPASWNETIRPDELIKKIAELMHEQVKGFVSYIPTLIGYLLITPLFAFLFLLNGNGI
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YKSLISLIPNRYFEMALMITYKINEQLTNYLKSLMIQSMIICAVSSLGFYIIGLPYFYIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFLGIANSIPYLGPIMGAIPPLFFALVIGGAGTTGLMISILIVVSIAQIIDNFLVQPVV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
ISGSMSLHPIVIVGAVTVGGAALGLVGMLIAVPMAAILKVTIQTLYSSMKDHNLL
EECCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRDPEIREFSGYFIRTSFFLIVVFTTVVSLWGLQLLAVPIVLALLIFYTFNGMINDLESL
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVPRILSIAILMLFTSIPIYLFINSVASPIASTLNPLLKNWKQDLDDAKFKYLTVTVNLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE
FNEFPASWNETIRPDELIKKIAELMHEQVKGFVSYIPTLIGYLLITPLFAFLFLLNGNGI
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YKSLISLIPNRYFEMALMITYKINEQLTNYLKSLMIQSMIICAVSSLGFYIIGLPYFYIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFLGIANSIPYLGPIMGAIPPLFFALVIGGAGTTGLMISILIVVSIAQIIDNFLVQPVV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
ISGSMSLHPIVIVGAVTVGGAALGLVGMLIAVPMAAILKVTIQTLYSSMKDHNLL
EECCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]