Click here to switch to the map view.

The map label for this gene is 116327616

Identifier: 116327616

GI number: 116327616

Start: 985032

End: 985352

Strand: Direct

Name: 116327616

Synonym: LBL_0848

Alternate gene names: NA

Gene position: 985032-985352 (Clockwise)

Preceding gene: 116327615

Following gene: 116327620

Centisome position: 27.25

GC content: 29.28

Gene sequence:

>321_bases
ATGAGCTATTTGATTGATACCGATATTATTATTTATAGTTTAAAAGAACATGAGAAAGTTCATAAAAATTTTTTAGAACG
TAAGAATGTTTCAAAATCAATTTCTGTAATTACGTACGGCGAACTAATTTTTGGAGCAAAAAAATCGAAAAGTCGAGAAA
AGAATTTAGCAACAGTTTATAGAATAGGAGAGTTATTTCCTGTTATCGAACTCACTCGAGGAATCATAGAAACCTTTGGT
GAATTAAAAGCTACTTTACAAAAAAAGGGATTAGCATTGATGATTTCGATCTTCTTATTGGTTCAACTGCTTTGTTCTTA
A

Upstream 100 bases:

>100_bases
TTAAAATTGTCGAATTCTTGGGTCGATAAACGAGATCCAAAAGAAATTGTTAAAGATCTACGCTCTTCACGTTCAAAAAA
CAATCGGGATAAGATAGTCA

Downstream 100 bases:

>100_bases
ATTATACTTTGGTGACTAATAATGAAAAACATTTTGGTAAGATTTCAGATTTAAGAATAGAAAATTGGAGTAAATAACTC
CAATAATTGCCTAACGTGAA

Product: VapC-like nucleic acid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSYLIDTDIIIYSLKEHEKVHKNFLERKNVSKSISVITYGELIFGAKKSKSREKNLATVYRIGELFPVIELTRGIIETFG
ELKATLQKKGLALMISIFLLVQLLCS

Sequences:

>Translated_106_residues
MSYLIDTDIIIYSLKEHEKVHKNFLERKNVSKSISVITYGELIFGAKKSKSREKNLATVYRIGELFPVIELTRGIIETFG
ELKATLQKKGLALMISIFLLVQLLCS
>Mature_105_residues
SYLIDTDIIIYSLKEHEKVHKNFLERKNVSKSISVITYGELIFGAKKSKSREKNLATVYRIGELFPVIELTRGIIETFGE
LKATLQKKGLALMISIFLLVQLLCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12078; Mature: 11946

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLIDTDIIIYSLKEHEKVHKNFLERKNVSKSISVITYGELIFGAKKSKSREKNLATVY
CCCEECCHHHEEHHHHHHHHHHHHHHHCCCCHHHHHEEHHHHHHCCCCCCCHHHHHHHHH
RIGELFPVIELTRGIIETFGELKATLQKKGLALMISIFLLVQLLCS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYLIDTDIIIYSLKEHEKVHKNFLERKNVSKSISVITYGELIFGAKKSKSREKNLATVY
CCEECCHHHEEHHHHHHHHHHHHHHHCCCCHHHHHEEHHHHHHCCCCCCCHHHHHHHHH
RIGELFPVIELTRGIIETFGELKATLQKKGLALMISIFLLVQLLCS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA