| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is zur [H]
Identifier: 115352698
GI number: 115352698
Start: 2913812
End: 2914273
Strand: Direct
Name: zur [H]
Synonym: Bamb_2647
Alternate gene names: 115352698
Gene position: 2913812-2914273 (Clockwise)
Preceding gene: 115352689
Following gene: 115352699
Centisome position: 81.93
GC content: 69.7
Gene sequence:
>462_bases ATGGCCACCTCATCGCCCATCGACGCCCGGCTATCCCGGGCCGACGCATTCGCCGCCGAGCACGGACTCGCGTGGACGCC GCTGCGCCGCCAGGTCTACGAACGCGTGCTGGCCGCGCAGCGCCCGATCGGCGCGTACGACCTGCTCGCCGAGCTCGAGC CGCAGCGCGGCCGCGTGCCGCCCACGACCGTCTATCGCGCGCTGGATTTCCTCGTCGAGCACGGCTTCATCCACCGGATC GAATCGAAGAACGCGTTCTTCGCGTGCTGCGAGATCGGCGTGCCGCACGAAGGCCAGTTCCTGATCTGCGATTCGTGCGG CGAGACCGTCGAGATCCCGGGCAGCGACCTCGCGAAGCAGCTGTCCGCGAGCGCGCCCGCGCACGGGTTCGAAGTCCATC ACCAGGTCGTCGAGCTGAACGGCCTGTGCGGGCACTGCAAGGGCAAGCCCGCGCATCGCTGA
Upstream 100 bases:
>100_bases GAAGGGGACGGAGCGTGTGCGCGGGACGGAATTCGGGCTGCACGGCAGGGAGATACGTTATATCATCGCCATACTTCGTT TCTCATGCCTGCTTCACGCC
Downstream 100 bases:
>100_bases CGCCGCCCCGCGCGGCGCTCGGCGCCGCCCCCTTCCAACGAGGAGTTCCATGTCCATTGCCCTGAAGCGCGCGCCACGAC GCGCCCAGCCGCTTGTTCGC
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MATSSPIDARLSRADAFAAEHGLAWTPLRRQVYERVLAAQRPIGAYDLLAELEPQRGRVPPTTVYRALDFLVEHGFIHRI ESKNAFFACCEIGVPHEGQFLICDSCGETVEIPGSDLAKQLSASAPAHGFEVHHQVVELNGLCGHCKGKPAHR
Sequences:
>Translated_153_residues MATSSPIDARLSRADAFAAEHGLAWTPLRRQVYERVLAAQRPIGAYDLLAELEPQRGRVPPTTVYRALDFLVEHGFIHRI ESKNAFFACCEIGVPHEGQFLICDSCGETVEIPGSDLAKQLSASAPAHGFEVHHQVVELNGLCGHCKGKPAHR >Mature_152_residues ATSSPIDARLSRADAFAAEHGLAWTPLRRQVYERVLAAQRPIGAYDLLAELEPQRGRVPPTTVYRALDFLVEHGFIHRIE SKNAFFACCEIGVPHEGQFLICDSCGETVEIPGSDLAKQLSASAPAHGFEVHHQVVELNGLCGHCKGKPAHR
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=137, Percent_Identity=36.4963503649635, Blast_Score=92, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16752; Mature: 16621
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSSPIDARLSRADAFAAEHGLAWTPLRRQVYERVLAAQRPIGAYDLLAELEPQRGRVP CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC PTTVYRALDFLVEHGFIHRIESKNAFFACCEIGVPHEGQFLICDSCGETVEIPGSDLAKQ HHHHHHHHHHHHHCCHHEEECCCCEEEEEEECCCCCCCCEEEECCCCCEEECCCHHHHHH LSASAPAHGFEVHHQVVELNGLCGHCKGKPAHR HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ATSSPIDARLSRADAFAAEHGLAWTPLRRQVYERVLAAQRPIGAYDLLAELEPQRGRVP CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC PTTVYRALDFLVEHGFIHRIESKNAFFACCEIGVPHEGQFLICDSCGETVEIPGSDLAKQ HHHHHHHHHHHHHCCHHEEECCCCEEEEEEECCCCCCCCEEEECCCCCEEECCCHHHHHH LSASAPAHGFEVHHQVVELNGLCGHCKGKPAHR HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]