Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is scbA [H]

Identifier: 115352699

GI number: 115352699

Start: 2914323

End: 2915237

Strand: Direct

Name: scbA [H]

Synonym: Bamb_2648

Alternate gene names: 115352699

Gene position: 2914323-2915237 (Clockwise)

Preceding gene: 115352698

Following gene: 115352700

Centisome position: 81.94

GC content: 68.09

Gene sequence:

>915_bases
ATGTCCATTGCCCTGAAGCGCGCGCCACGACGCGCCCAGCCGCTTGTTCGCCTGCTGGCCGCCTCGGCTGCCGCGCTGTC
GATCGCGGCGCCCGCCTGCGCGCAGGCCGCGACCGTCAACGTCGTCGCCGCCGAGAATTTCTATGGCGACGTCGCATCGC
AGATCGGCGGCCGCCATGTCGCGGTCACCAGCATCCTCAGCAATCCCGACCAGGATCCGCACCTGTTCGAAGCGAGCCCG
AAGACCGCGCGCGCGCTGCAGCATGCGCAGGTCGTGATCTACAACGGCGCGAACTACGATCCGTGGATGAGCAAGCTGCT
CGGCGCGTCGAAGCAGGCGAAGCGCGCGACGATCGTCGTCGCCGATCTCGTCGGCAAGAAGGCCGGCGACAACCCGCACG
TCTGGTACGACCCGGCGACCATGCCGGCCGCCGCGCGCGCGATCGCGGCCGAATTCGGCCGTGCCGATCCGGCGAACAAG
GCCGACTACGACGCGAACCTGCAAAAGTTCGTCGCGTCGCTGAAACCCGTCGACGACAAGGTCGCCGCGCTGCGCGCGCA
GTACAAGGGCGTGCCGGTGACGGCCACGGAGCCCGTGTTCGGCTACATGTCCGACGCGATCGGCCTCGACATGCGCAACC
AGCGCTTCCAGCTCGCGACGATGAACGACACCGAAGCCAGCGCGCAGGACGTCGCCGCGTTCGAGAACGACCTGCGCAAG
AAGCAGGTGCGCGTGCTGATCTACAACAGCCAGGCCGAAGCGCCGATGACCAAGCGCCTGCTGAAAATCGCGCGCGACGG
CGGCGTGCCGAGCGTGAGCGTCACCGAGACGCAACCGGCCGGCAAGACCTTCCAGCAATGGATGACCGGCCAGCTCGACG
CGCTCGCGGCCGCGCTTTCCGCCAGCAAGAAATGA

Upstream 100 bases:

>100_bases
GAGCTGAACGGCCTGTGCGGGCACTGCAAGGGCAAGCCCGCGCATCGCTGACGCCGCCCCGCGCGGCGCTCGGCGCCGCC
CCCTTCCAACGAGGAGTTCC

Downstream 100 bases:

>100_bases
TCGACGCAACGACATGAGCCCCACTCCCCACGCACTCGCACTCGATCGCGTCACGCTCGAACTGGGCGGCCGCACGATCC
TGCGCGACGTCAGCTTCTCG

Product: periplasmic solute binding protein

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSIALKRAPRRAQPLVRLLAASAAALSIAAPACAQAATVNVVAAENFYGDVASQIGGRHVAVTSILSNPDQDPHLFEASP
KTARALQHAQVVIYNGANYDPWMSKLLGASKQAKRATIVVADLVGKKAGDNPHVWYDPATMPAAARAIAAEFGRADPANK
ADYDANLQKFVASLKPVDDKVAALRAQYKGVPVTATEPVFGYMSDAIGLDMRNQRFQLATMNDTEASAQDVAAFENDLRK
KQVRVLIYNSQAEAPMTKRLLKIARDGGVPSVSVTETQPAGKTFQQWMTGQLDALAAALSASKK

Sequences:

>Translated_304_residues
MSIALKRAPRRAQPLVRLLAASAAALSIAAPACAQAATVNVVAAENFYGDVASQIGGRHVAVTSILSNPDQDPHLFEASP
KTARALQHAQVVIYNGANYDPWMSKLLGASKQAKRATIVVADLVGKKAGDNPHVWYDPATMPAAARAIAAEFGRADPANK
ADYDANLQKFVASLKPVDDKVAALRAQYKGVPVTATEPVFGYMSDAIGLDMRNQRFQLATMNDTEASAQDVAAFENDLRK
KQVRVLIYNSQAEAPMTKRLLKIARDGGVPSVSVTETQPAGKTFQQWMTGQLDALAAALSASKK
>Mature_303_residues
SIALKRAPRRAQPLVRLLAASAAALSIAAPACAQAATVNVVAAENFYGDVASQIGGRHVAVTSILSNPDQDPHLFEASPK
TARALQHAQVVIYNGANYDPWMSKLLGASKQAKRATIVVADLVGKKAGDNPHVWYDPATMPAAARAIAAEFGRADPANKA
DYDANLQKFVASLKPVDDKVAALRAQYKGVPVTATEPVFGYMSDAIGLDMRNQRFQLATMNDTEASAQDVAAFENDLRKK
QVRVLIYNSQAEAPMTKRLLKIARDGGVPSVSVTETQPAGKTFQQWMTGQLDALAAALSASKK

Specific function: Part of an ATP-driven transport system for manganese. Does not exhibit adhesion properties [H]

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR006128 [H]

Pfam domain/function: PF01297 SBP_bac_9 [H]

EC number: NA

Molecular weight: Translated: 32399; Mature: 32268

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIALKRAPRRAQPLVRLLAASAAALSIAAPACAQAATVNVVAAENFYGDVASQIGGRHV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEECHHHHHHHHHHCCCEE
AVTSILSNPDQDPHLFEASPKTARALQHAQVVIYNGANYDPWMSKLLGASKQAKRATIVV
EEHHHHCCCCCCCCEECCCCHHHHHHHHCEEEEEECCCCCHHHHHHHCCCCCCCHHEEEE
ADLVGKKAGDNPHVWYDPATMPAAARAIAAEFGRADPANKADYDANLQKFVASLKPVDDK
EHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHH
VAALRAQYKGVPVTATEPVFGYMSDAIGLDMRNQRFQLATMNDTEASAQDVAAFENDLRK
HHHHHHHHCCCCCEECCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
KQVRVLIYNSQAEAPMTKRLLKIARDGGVPSVSVTETQPAGKTFQQWMTGQLDALAAALS
CEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHH
ASKK
HCCC
>Mature Secondary Structure 
SIALKRAPRRAQPLVRLLAASAAALSIAAPACAQAATVNVVAAENFYGDVASQIGGRHV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEECHHHHHHHHHHCCCEE
AVTSILSNPDQDPHLFEASPKTARALQHAQVVIYNGANYDPWMSKLLGASKQAKRATIVV
EEHHHHCCCCCCCCEECCCCHHHHHHHHCEEEEEECCCCCHHHHHHHCCCCCCCHHEEEE
ADLVGKKAGDNPHVWYDPATMPAAARAIAAEFGRADPANKADYDANLQKFVASLKPVDDK
EHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHH
VAALRAQYKGVPVTATEPVFGYMSDAIGLDMRNQRFQLATMNDTEASAQDVAAFENDLRK
HHHHHHHHCCCCCEECCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
KQVRVLIYNSQAEAPMTKRLLKIARDGGVPSVSVTETQPAGKTFQQWMTGQLDALAAALS
CEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHH
ASKK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8675315 [H]