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The map label for this gene is yusZ [H]

Identifier: 115352580

GI number: 115352580

Start: 2786888

End: 2787787

Strand: Direct

Name: yusZ [H]

Synonym: Bamb_2529

Alternate gene names: 115352580

Gene position: 2786888-2787787 (Clockwise)

Preceding gene: 115352579

Following gene: 115352582

Centisome position: 78.36

GC content: 70.89

Gene sequence:

>900_bases
ATGAAGGAAGTCATTCTCGTCACCGGCGCGTCCAGCGGCTTCGGCCTGCTGACGGCCCAGGCGCTCGCCCGCGCCGGCCA
TACGGTCTATGCGTCGATGCGCGAGAGCGCCGGGCGCAATGCGCCGCGCGTCGCCGCCATCGCCGACTACGCACGCGAGC
ACGGCGTCGACCTGCGCACCGTCGAACTCGACGTCGGCGACGACGCATCCGTCGCCGCCGCGATCGAGCGCGTGATCGCG
GACAACGGCCGCCTCGACATCGTCGTCCACAATGCCGGCCACATGGTGTTCGGCCCGGCGGAAGCGTTCACGCCCGATCA
GCTGGCGCGGCTCTACGACATCAACGTCGTGTCCACGCAGCGCGTGAACCGGGCCGTGCTGCCGCACCTGCGCAGCCGGG
GCCGCGGCCTGCTCGTGTGGGTGTCGTCCTCGTCGGCGCGCGGCGGCACGCCGCCGTTCCTCGCACCCTACTTCGCCGCG
AAGGCCGCGATGGATTCGCTCGCGGTGTCCTATGCGGCCGAGCTCGCGCGCTGGGGCATCGAAACATCGATCGTCGTACC
GGGCGCGTTCACCCACGGCACGAATCACTTCGCCCACGCGGGCAAGCCGGCCGATGCGGCGGTGCAGGCCGCGTACGACG
ACGGCCCCTACGCGAGGGTCGCCGAGCAGGCGTTGCAAGGCCTCACCGCACTCGAGCCCGCGGACGCCGATGCCGCCACC
GTCGCGACGGCGATCGTCGACATCGTCGCCGCGCCGTCAGGCAAGCGCCCGTACCGCGTATTCGTCGATCCGTCGCAGGA
CGGCGCGGAGGAAGTGTTCCGTATTGGCGATCGCATTCGCCGCGAGATGTTCCGCAACATCGGACTCGCCGACCTGCTCG
CGCCCCGCGTCGGCAACTGA

Upstream 100 bases:

>100_bases
TGCGCGCCAACGGCGGCATGTGCTGACCGACGCAGGAACCGCGCACACCAGACTAGGGCCGCCCGCCGGGGCCGCCCCAC
CCGCTTGCAGGAGATCGATC

Downstream 100 bases:

>100_bases
TCGCGCCGCGCGCCGGGCCGGCCGGCGCGCATCAGTCTCGCTCGCAGAATCCGAGGATTGCCTCCGCGACCGCGGCCGGC
GCCTCCCGCTGTGGAAAGTG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKEVILVTGASSGFGLLTAQALARAGHTVYASMRESAGRNAPRVAAIADYAREHGVDLRTVELDVGDDASVAAAIERVIA
DNGRLDIVVHNAGHMVFGPAEAFTPDQLARLYDINVVSTQRVNRAVLPHLRSRGRGLLVWVSSSSARGGTPPFLAPYFAA
KAAMDSLAVSYAAELARWGIETSIVVPGAFTHGTNHFAHAGKPADAAVQAAYDDGPYARVAEQALQGLTALEPADADAAT
VATAIVDIVAAPSGKRPYRVFVDPSQDGAEEVFRIGDRIRREMFRNIGLADLLAPRVGN

Sequences:

>Translated_299_residues
MKEVILVTGASSGFGLLTAQALARAGHTVYASMRESAGRNAPRVAAIADYAREHGVDLRTVELDVGDDASVAAAIERVIA
DNGRLDIVVHNAGHMVFGPAEAFTPDQLARLYDINVVSTQRVNRAVLPHLRSRGRGLLVWVSSSSARGGTPPFLAPYFAA
KAAMDSLAVSYAAELARWGIETSIVVPGAFTHGTNHFAHAGKPADAAVQAAYDDGPYARVAEQALQGLTALEPADADAAT
VATAIVDIVAAPSGKRPYRVFVDPSQDGAEEVFRIGDRIRREMFRNIGLADLLAPRVGN
>Mature_299_residues
MKEVILVTGASSGFGLLTAQALARAGHTVYASMRESAGRNAPRVAAIADYAREHGVDLRTVELDVGDDASVAAAIERVIA
DNGRLDIVVHNAGHMVFGPAEAFTPDQLARLYDINVVSTQRVNRAVLPHLRSRGRGLLVWVSSSSARGGTPPFLAPYFAA
KAAMDSLAVSYAAELARWGIETSIVVPGAFTHGTNHFAHAGKPADAAVQAAYDDGPYARVAEQALQGLTALEPADADAAT
VATAIVDIVAAPSGKRPYRVFVDPSQDGAEEVFRIGDRIRREMFRNIGLADLLAPRVGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI223718074, Length=194, Percent_Identity=38.659793814433, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI7657478, Length=187, Percent_Identity=32.0855614973262, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI119392083, Length=266, Percent_Identity=28.9473684210526, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI150247226, Length=242, Percent_Identity=28.9256198347107, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI20149619, Length=258, Percent_Identity=26.7441860465116, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI7706318, Length=190, Percent_Identity=30, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87082100, Length=201, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786701, Length=227, Percent_Identity=29.5154185022026, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788459, Length=199, Percent_Identity=29.6482412060301, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1786812, Length=186, Percent_Identity=30.1075268817204, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787335, Length=189, Percent_Identity=30.1587301587302, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787820, Length=240, Percent_Identity=27.5, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790717, Length=186, Percent_Identity=26.3440860215054, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI2367175, Length=205, Percent_Identity=29.2682926829268, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115534660, Length=192, Percent_Identity=32.2916666666667, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=211, Percent_Identity=32.2274881516588, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=215, Percent_Identity=28.8372093023256, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=248, Percent_Identity=27.8225806451613, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=188, Percent_Identity=30.3191489361702, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=198, Percent_Identity=30.8080808080808, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=219, Percent_Identity=29.2237442922374, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=186, Percent_Identity=30.1075268817204, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=201, Percent_Identity=31.3432835820896, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17557780, Length=196, Percent_Identity=27.5510204081633, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17562908, Length=212, Percent_Identity=29.7169811320755, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=208, Percent_Identity=29.3269230769231, Blast_Score=64, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17538486, Length=215, Percent_Identity=27.906976744186, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI28571526, Length=223, Percent_Identity=30.4932735426009, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI23397609, Length=224, Percent_Identity=30.8035714285714, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21357041, Length=189, Percent_Identity=32.2751322751323, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24651139, Length=283, Percent_Identity=26.8551236749117, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281364892, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21358495, Length=240, Percent_Identity=27.9166666666667, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24644339, Length=207, Percent_Identity=30.9178743961353, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31563; Mature: 31563

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVILVTGASSGFGLLTAQALARAGHTVYASMRESAGRNAPRVAAIADYAREHGVDLRT
CCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEE
VELDVGDDASVAAAIERVIADNGRLDIVVHNAGHMVFGPAEAFTPDQLARLYDINVVSTQ
EEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHCCEEECHH
RVNRAVLPHLRSRGRGLLVWVSSSSARGGTPPFLAPYFAAKAAMDSLAVSYAAELARWGI
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
ETSIVVPGAFTHGTNHFAHAGKPADAAVQAAYDDGPYARVAEQALQGLTALEPADADAAT
CEEEEECCCEECCCCCHHCCCCCHHHHEEECCCCCCHHHHHHHHHHCCHHCCCCCCHHHH
VATAIVDIVAAPSGKRPYRVFVDPSQDGAEEVFRIGDRIRREMFRNIGLADLLAPRVGN
HHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC
>Mature Secondary Structure
MKEVILVTGASSGFGLLTAQALARAGHTVYASMRESAGRNAPRVAAIADYAREHGVDLRT
CCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEE
VELDVGDDASVAAAIERVIADNGRLDIVVHNAGHMVFGPAEAFTPDQLARLYDINVVSTQ
EEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHCCEEECHH
RVNRAVLPHLRSRGRGLLVWVSSSSARGGTPPFLAPYFAAKAAMDSLAVSYAAELARWGI
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
ETSIVVPGAFTHGTNHFAHAGKPADAAVQAAYDDGPYARVAEQALQGLTALEPADADAAT
CEEEEECCCEECCCCCHHCCCCCHHHHEEECCCCCCHHHHHHHHHHCCHHCCCCCCHHHH
VATAIVDIVAAPSGKRPYRVFVDPSQDGAEEVFRIGDRIRREMFRNIGLADLLAPRVGN
HHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 8396117 [H]