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The map label for this gene is omp32 [H]

Identifier: 115352506

GI number: 115352506

Start: 2702231

End: 2703316

Strand: Direct

Name: omp32 [H]

Synonym: Bamb_2455

Alternate gene names: 115352506

Gene position: 2702231-2703316 (Clockwise)

Preceding gene: 115352505

Following gene: 115352509

Centisome position: 75.98

GC content: 66.02

Gene sequence:

>1086_bases
ATGATGAAGAAAGCTTTGGTCGCGGCCGCGCTGATGGCTGCTGGGGTGGTTACGGCGCACGCGCAGAGCAGCGTCACGCT
GTACGGTCGCCTGGATGCCGGCCTTGAGTACCTGAACGGCCTGCAGAACGGCCACCAAGTGCGCGCGGAAAGCGGCGACT
GGGGCACGAGCCTGTGGGGCTTGAAGGGTAGCGAGGACATCGGCGGCGGCAACAAGGTCCTGTTCCACCTCGAAGGCGCG
TTCAACACGATGAACGGCGGGCTCGGCACGAGCGGCTCGATCTGGGATCGTTTCGCGACCGTCGGCATCTCCAACGACCG
CTACGGTACGCTGCTGCTGGGTCGCGAACTCGCGATCGCGAACGGCGTGTGGGACTTCGATCCGCTGGGCCAGTCGAGCT
GGTCGTCGGCATCGCTCGTGCGCGGCCGCAACTGGAACAAGACCAGCAACAACGTGTCGTACCAGTCGCCGCAGTTCTAC
GGCCTCGACTTCTACGGCCAGTTCGCGTTCTCGAACTCGACCAGCTTCAACGGCAACACGACGGCCGGGCAGCCGGGCCG
TGCGGCCGGCGCGCAGGTCACGTACACGAACTCGCTGTTCCAGGTGCGCGGCATCTACGACGAAACGCGCGACAGCAACG
GCCGCTTCTCCGACGTGTTCAACTACTCGCGTGAATACTTCGCGGGCCTGAACGTGTTCCTCGGCCAGTTCAAGCTGCAA
GCGGCTTATCAGTCGTCGCACGCGGACGGCAGCGGCGGCCCGGCCGTCAACAACGGCATCACCGGCACCCAGCAGGTCTG
GGGCGGCGTGACGTGGCAAGCCACGCCGGCGGCGGCGCTGATCGCAGCCGTGTACCACGTGAATGCGAACCACGGCGGCG
GCAACGCGAACATCTACACGGTCGGCGGTTCGTACAACATCTCGAAGCGCACGCTGTTCGACCTGCAGGTCGCGACGGTG
CGCAACAGCTCGACGGCCAACTTCGGCCTGAACGCGAACGGTGCGGGCACCGCCGTATCGACGGGCAACCCGCATCCGGG
CGGCAGCCAGACCGGCGTCTACGCCGGCATCCAGCACCTGTTCTGA

Upstream 100 bases:

>100_bases
GAGGTCTCCCTGGTTATCCCGCTTTTCGCTTTTGCCCGACGCTCGCCGCGCCGGGCATCTCGTGCAGTCTGGGTTGACTT
TTTGACAGGGTATGGAGGAG

Downstream 100 bases:

>100_bases
TCAGGCGCCCTCCAGAGAACGATTCGACAACACTTTCCACGCTGCTGCGAGAGGCGCGTATCGGTGCGGTACCCACCCGG
GTATCGCACCGTTTTTTATT

Product: outer membrane protein (porin)-like protein

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MMKKALVAAALMAAGVVTAHAQSSVTLYGRLDAGLEYLNGLQNGHQVRAESGDWGTSLWGLKGSEDIGGGNKVLFHLEGA
FNTMNGGLGTSGSIWDRFATVGISNDRYGTLLLGRELAIANGVWDFDPLGQSSWSSASLVRGRNWNKTSNNVSYQSPQFY
GLDFYGQFAFSNSTSFNGNTTAGQPGRAAGAQVTYTNSLFQVRGIYDETRDSNGRFSDVFNYSREYFAGLNVFLGQFKLQ
AAYQSSHADGSGGPAVNNGITGTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIYTVGGSYNISKRTLFDLQVATV
RNSSTANFGLNANGAGTAVSTGNPHPGGSQTGVYAGIQHLF

Sequences:

>Translated_361_residues
MMKKALVAAALMAAGVVTAHAQSSVTLYGRLDAGLEYLNGLQNGHQVRAESGDWGTSLWGLKGSEDIGGGNKVLFHLEGA
FNTMNGGLGTSGSIWDRFATVGISNDRYGTLLLGRELAIANGVWDFDPLGQSSWSSASLVRGRNWNKTSNNVSYQSPQFY
GLDFYGQFAFSNSTSFNGNTTAGQPGRAAGAQVTYTNSLFQVRGIYDETRDSNGRFSDVFNYSREYFAGLNVFLGQFKLQ
AAYQSSHADGSGGPAVNNGITGTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIYTVGGSYNISKRTLFDLQVATV
RNSSTANFGLNANGAGTAVSTGNPHPGGSQTGVYAGIQHLF
>Mature_361_residues
MMKKALVAAALMAAGVVTAHAQSSVTLYGRLDAGLEYLNGLQNGHQVRAESGDWGTSLWGLKGSEDIGGGNKVLFHLEGA
FNTMNGGLGTSGSIWDRFATVGISNDRYGTLLLGRELAIANGVWDFDPLGQSSWSSASLVRGRNWNKTSNNVSYQSPQFY
GLDFYGQFAFSNSTSFNGNTTAGQPGRAAGAQVTYTNSLFQVRGIYDETRDSNGRFSDVFNYSREYFAGLNVFLGQFKLQ
AAYQSSHADGSGGPAVNNGITGTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIYTVGGSYNISKRTLFDLQVATV
RNSSTANFGLNANGAGTAVSTGNPHPGGSQTGVYAGIQHLF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38037; Mature: 38037

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKALVAAALMAAGVVTAHAQSSVTLYGRLDAGLEYLNGLQNGHQVRAESGDWGTSLWG
CCHHHHHHHHHHHHHHHEECCCCCEEEEEEHHHHHHHHHHCCCCCEEEECCCCCCCEECC
LKGSEDIGGGNKVLFHLEGAFNTMNGGLGTSGSIWDRFATVGISNDRYGTLLLGRELAIA
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHEEEECCCCCCEEEEEECEEEEE
NGVWDFDPLGQSSWSSASLVRGRNWNKTSNNVSYQSPQFYGLDFYGQFAFSNSTSFNGNT
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEECEEEEEEEEECCCCCCCCCC
TAGQPGRAAGAQVTYTNSLFQVRGIYDETRDSNGRFSDVFNYSREYFAGLNVFLGQFKLQ
CCCCCCCCCCCEEEEECCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEE
AAYQSSHADGSGGPAVNNGITGTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIYT
EHHHCCCCCCCCCCCCCCCCCCHHHHHCCEEECCCHHHHHHHHHEEEECCCCCCCCEEEE
VGGSYNISKRTLFDLQVATVRNSSTANFGLNANGAGTAVSTGNPHPGGSQTGVYAGIQHL
ECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHC
F
C
>Mature Secondary Structure
MMKKALVAAALMAAGVVTAHAQSSVTLYGRLDAGLEYLNGLQNGHQVRAESGDWGTSLWG
CCHHHHHHHHHHHHHHHEECCCCCEEEEEEHHHHHHHHHHCCCCCEEEECCCCCCCEECC
LKGSEDIGGGNKVLFHLEGAFNTMNGGLGTSGSIWDRFATVGISNDRYGTLLLGRELAIA
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHEEEECCCCCCEEEEEECEEEEE
NGVWDFDPLGQSSWSSASLVRGRNWNKTSNNVSYQSPQFYGLDFYGQFAFSNSTSFNGNT
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEECEEEEEEEEECCCCCCCCCC
TAGQPGRAAGAQVTYTNSLFQVRGIYDETRDSNGRFSDVFNYSREYFAGLNVFLGQFKLQ
CCCCCCCCCCCEEEEECCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEE
AAYQSSHADGSGGPAVNNGITGTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIYT
EHHHCCCCCCCCCCCCCCCCCCHHHHHCCEEECCCHHHHHHHHHEEEECCCCCCCCEEEE
VGGSYNISKRTLFDLQVATVRNSSTANFGLNANGAGTAVSTGNPHPGGSQTGVYAGIQHL
ECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]