Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352509

Identifier: 115352509

GI number: 115352509

Start: 2705791

End: 2706915

Strand: Direct

Name: 115352509

Synonym: Bamb_2458

Alternate gene names: NA

Gene position: 2705791-2706915 (Clockwise)

Preceding gene: 115352506

Following gene: 115352511

Centisome position: 76.08

GC content: 68.44

Gene sequence:

>1125_bases
GTGCCGGCCGACGAATGGAACGCGCTGCTCGAACGCGACGCGCAGCCGACGCCGTTCCTGCGCCACGAATTCCTCGACGC
GCTGCACGTCGCGCGCTGCGCGGTCGACGACACCGGCTGGTCGCCGCACTTCGTCACGCTGACCGATCCACGCACGGGGC
GGCTCGCGGCCGCCGCGCCCGTCTATGCGAAGCAGCATTCGTACGGCGAATACGTGTTCGACTGGGCATGGGCCGACGCG
TACCAGCGTAACGGCCTGTCCTACTACCCGAAGCTGCTGTGCGCGGTGCCGTTCACGCCCGTGCAGGGCACGCGCCTGCT
CGCGGCCGACGACGACGCACGTCGCCGGCTCGCGGCCACGCTGCTCGCGTTCGCCGAGCAGAGCGACGTGTCGTCGCTGC
ACGTGCTGTTTCCGACCGGCGACGAAGCGCGGCTGCTCGAATCGCTGGGGATGATGCTGCGCGAAGGCGTGCAGTTCCAC
TGGCTCAACGACGGCTACCGCGACTTCGACGACTTCCTCGGCACGCTCGAGCAGAAGAAGCGCAAGAACATCCGCGCCGA
ACGGCGCAAGGTGCGCGATGCCGGCGTCACGTTCCGGCGGATGACCGGCGATCGGATCACCGATGCCGACTGGCGCTTCT
TCTCGCGCTGCTACCGGCAGACCTACCGCGAACACTACTCGAGCCCGTACCTGAATCTCGACTTCTTCCGCGCGATCGGC
GCGACGATGCCGGAGAACCTGCTGCTCGTGATCGCCGAAGCCGACGGCCACCCGATCGCGAGCTCGCTCGCCGTCTACCG
GCGCGGCGCGAACGGCGGCGGCACGCTGTACGGCCGCTACTGGGGCGCGCTCGAGCACGTGCCCTGCCTGCATTTCGAAA
CGGCGTACTACCAGCTGCTCGAATTCTGCATCGAGGCCGGGCTCGACACGTTCGAGGGCGGCGCGCAGGGCGAGCACAAG
CTCGCGCGCGGCTTCCTGCCGACCGTCACGCATTCCGCGCACTGGCTCGCGCATCCGGCATTCTCCGATGCGGTCGCGCA
TTTTCTCGCACGCGAGACCGAGCATATCCACGCGTACGTCGACGAACTCCGCGAACACGATCCGTTCCGGCGCAGCACCG
GCTAG

Upstream 100 bases:

>100_bases
CCATGGCGGCACGCATCCGGCGGCATCCAACAGTACGGGTTCACGCTTGAAACACGAACGCATCGATTATCGCACGGGCA
TCCTGTCGTCCCCCGCGGAA

Downstream 100 bases:

>100_bases
CGTCATTCTGCATACCGGCATGCGGCGAGGCCGCGCATGGCCTCGCCGCATGCCGCACGACCGCGGCCGGCTCAGTGCGC
GGCGAGCGTCACCGTCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MPADEWNALLERDAQPTPFLRHEFLDALHVARCAVDDTGWSPHFVTLTDPRTGRLAAAAPVYAKQHSYGEYVFDWAWADA
YQRNGLSYYPKLLCAVPFTPVQGTRLLAADDDARRRLAATLLAFAEQSDVSSLHVLFPTGDEARLLESLGMMLREGVQFH
WLNDGYRDFDDFLGTLEQKKRKNIRAERRKVRDAGVTFRRMTGDRITDADWRFFSRCYRQTYREHYSSPYLNLDFFRAIG
ATMPENLLLVIAEADGHPIASSLAVYRRGANGGGTLYGRYWGALEHVPCLHFETAYYQLLEFCIEAGLDTFEGGAQGEHK
LARGFLPTVTHSAHWLAHPAFSDAVAHFLARETEHIHAYVDELREHDPFRRSTG

Sequences:

>Translated_374_residues
MPADEWNALLERDAQPTPFLRHEFLDALHVARCAVDDTGWSPHFVTLTDPRTGRLAAAAPVYAKQHSYGEYVFDWAWADA
YQRNGLSYYPKLLCAVPFTPVQGTRLLAADDDARRRLAATLLAFAEQSDVSSLHVLFPTGDEARLLESLGMMLREGVQFH
WLNDGYRDFDDFLGTLEQKKRKNIRAERRKVRDAGVTFRRMTGDRITDADWRFFSRCYRQTYREHYSSPYLNLDFFRAIG
ATMPENLLLVIAEADGHPIASSLAVYRRGANGGGTLYGRYWGALEHVPCLHFETAYYQLLEFCIEAGLDTFEGGAQGEHK
LARGFLPTVTHSAHWLAHPAFSDAVAHFLARETEHIHAYVDELREHDPFRRSTG
>Mature_373_residues
PADEWNALLERDAQPTPFLRHEFLDALHVARCAVDDTGWSPHFVTLTDPRTGRLAAAAPVYAKQHSYGEYVFDWAWADAY
QRNGLSYYPKLLCAVPFTPVQGTRLLAADDDARRRLAATLLAFAEQSDVSSLHVLFPTGDEARLLESLGMMLREGVQFHW
LNDGYRDFDDFLGTLEQKKRKNIRAERRKVRDAGVTFRRMTGDRITDADWRFFSRCYRQTYREHYSSPYLNLDFFRAIGA
TMPENLLLVIAEADGHPIASSLAVYRRGANGGGTLYGRYWGALEHVPCLHFETAYYQLLEFCIEAGLDTFEGGAQGEHKL
ARGFLPTVTHSAHWLAHPAFSDAVAHFLARETEHIHAYVDELREHDPFRRSTG

Specific function: Unknown

COG id: COG3146

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42604; Mature: 42473

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPADEWNALLERDAQPTPFLRHEFLDALHVARCAVDDTGWSPHFVTLTDPRTGRLAAAAP
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEECCC
VYAKQHSYGEYVFDWAWADAYQRNGLSYYPKLLCAVPFTPVQGTRLLAADDDARRRLAAT
HHHHHCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHH
LLAFAEQSDVSSLHVLFPTGDEARLLESLGMMLREGVQFHWLNDGYRDFDDFLGTLEQKK
HHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHH
RKNIRAERRKVRDAGVTFRRMTGDRITDADWRFFSRCYRQTYREHYSSPYLNLDFFRAIG
HHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
ATMPENLLLVIAEADGHPIASSLAVYRRGANGGGTLYGRYWGALEHVPCLHFETAYYQLL
CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHH
EFCIEAGLDTFEGGAQGEHKLARGFLPTVTHSAHWLAHPAFSDAVAHFLARETEHIHAYV
HHHHHCCCCCCCCCCCCHHHHHHCCCHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
DELREHDPFRRSTG
HHHHHCCCCCCCCC
>Mature Secondary Structure 
PADEWNALLERDAQPTPFLRHEFLDALHVARCAVDDTGWSPHFVTLTDPRTGRLAAAAP
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEECCC
VYAKQHSYGEYVFDWAWADAYQRNGLSYYPKLLCAVPFTPVQGTRLLAADDDARRRLAAT
HHHHHCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHH
LLAFAEQSDVSSLHVLFPTGDEARLLESLGMMLREGVQFHWLNDGYRDFDDFLGTLEQKK
HHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHH
RKNIRAERRKVRDAGVTFRRMTGDRITDADWRFFSRCYRQTYREHYSSPYLNLDFFRAIG
HHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
ATMPENLLLVIAEADGHPIASSLAVYRRGANGGGTLYGRYWGALEHVPCLHFETAYYQLL
CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHH
EFCIEAGLDTFEGGAQGEHKLARGFLPTVTHSAHWLAHPAFSDAVAHFLARETEHIHAYV
HHHHHCCCCCCCCCCCCHHHHHHCCCHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
DELREHDPFRRSTG
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA