Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352461

Identifier: 115352461

GI number: 115352461

Start: 2657604

End: 2658557

Strand: Direct

Name: 115352461

Synonym: Bamb_2410

Alternate gene names: NA

Gene position: 2657604-2658557 (Clockwise)

Preceding gene: 115352460

Following gene: 115352462

Centisome position: 74.72

GC content: 59.01

Gene sequence:

>954_bases
ATGGCACGCACCCAACAGCTCACCGCCGCAGTTCAGGCAAAGCCCAATTTGACCATCGACGCAGAGACGATCAGCAATCT
GCGCGAACTGCTCGATCAGCGTAAAAAACTCGATGATGCCGTCAACGCAGCTCCGGCGGAAATCAGCTCGCTCGAGGCCG
AACTCTCGAGCCTTCGCCAACAAATGGGCGCTCTCGAAGCCGATGTCGTTTTCATCGATGAAACGCAGCTGCCCGCCAAG
CAGAAGCAAATCAAGGCGCTGAACGAAGTTCTCGCGGAGAAGGAGCTCGCCGTCCGTCGTAAGAAGGTGCTCCTCGAAAC
ACTTGAGGCCCGTGCGCCGGACCTCGACGAAAAAATCGAAATTGCAATTGGCTTCGTCCGAGTCGAGGCCGGTATCGCAT
CGCAGTCGCTGCGATCCGACATCGCCGAAGAACTGCGCGGCAAAGTCCATGAGCTGCAACAGATCTACGCGAAAGTTCGG
GCACTGAACGGCCTTGTGCGGAACGATCGCACGGCGGATTTCCTGCTGAGTGCGCTTGTTCCCGATCTCGATCACTGCAT
GCGCGTCATCACGCAGACCGGGACATACGAGCAATCAACCAATCTGTTGGAAATCAGAACCGACGACACCGCGGCGGCCG
AGGCGGAGATCTCCGAAGTAATGCGACCAATCACAGAAGTGTTGGCGCTCGCGCGGAATCATCGTCCGTATGTGCCGCTC
GCTAAACGCCCGGCTCCGTATGTCCGCAAGGGGGCATGGGATGGCCCTGGAGGTCGCGTCGATCGCCCGGAGGAACCCGA
GGAACCGCCGGTGCGTATGAAAACGATCGACGAGGCCCTCGCCGAGCCGTACGAAATCAAGGGCGATTCCAGCGGCTTCC
GGACGTGGAAGCAAGCTCAAGAAATGAACATGACTGCGGCGATCACCGACGCGCAGCAGTCTGCCGAGCAGTAA

Upstream 100 bases:

>100_bases
CATACGGTCACCGTACGGTCGCACTGGCTGACTACCGTAGCTAAAGTGCTCTCGACATCTCGCGCCCGCATCGCGCTGGC
GCCCAGACCGAGAGGACTCT

Downstream 100 bases:

>100_bases
GGATCAAGCAATGAACAGGGGAACTTCAAATTCGATCTCTGCGATAACCGGAGTGAGTATGCAGGCAACTTCCACGAGCT
CGACATGAGCCGCTACGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MARTQQLTAAVQAKPNLTIDAETISNLRELLDQRKKLDDAVNAAPAEISSLEAELSSLRQQMGALEADVVFIDETQLPAK
QKQIKALNEVLAEKELAVRRKKVLLETLEARAPDLDEKIEIAIGFVRVEAGIASQSLRSDIAEELRGKVHELQQIYAKVR
ALNGLVRNDRTADFLLSALVPDLDHCMRVITQTGTYEQSTNLLEIRTDDTAAAEAEISEVMRPITEVLALARNHRPYVPL
AKRPAPYVRKGAWDGPGGRVDRPEEPEEPPVRMKTIDEALAEPYEIKGDSSGFRTWKQAQEMNMTAAITDAQQSAEQ

Sequences:

>Translated_317_residues
MARTQQLTAAVQAKPNLTIDAETISNLRELLDQRKKLDDAVNAAPAEISSLEAELSSLRQQMGALEADVVFIDETQLPAK
QKQIKALNEVLAEKELAVRRKKVLLETLEARAPDLDEKIEIAIGFVRVEAGIASQSLRSDIAEELRGKVHELQQIYAKVR
ALNGLVRNDRTADFLLSALVPDLDHCMRVITQTGTYEQSTNLLEIRTDDTAAAEAEISEVMRPITEVLALARNHRPYVPL
AKRPAPYVRKGAWDGPGGRVDRPEEPEEPPVRMKTIDEALAEPYEIKGDSSGFRTWKQAQEMNMTAAITDAQQSAEQ
>Mature_316_residues
ARTQQLTAAVQAKPNLTIDAETISNLRELLDQRKKLDDAVNAAPAEISSLEAELSSLRQQMGALEADVVFIDETQLPAKQ
KQIKALNEVLAEKELAVRRKKVLLETLEARAPDLDEKIEIAIGFVRVEAGIASQSLRSDIAEELRGKVHELQQIYAKVRA
LNGLVRNDRTADFLLSALVPDLDHCMRVITQTGTYEQSTNLLEIRTDDTAAAEAEISEVMRPITEVLALARNHRPYVPLA
KRPAPYVRKGAWDGPGGRVDRPEEPEEPPVRMKTIDEALAEPYEIKGDSSGFRTWKQAQEMNMTAAITDAQQSAEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35196; Mature: 35065

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTQQLTAAVQAKPNLTIDAETISNLRELLDQRKKLDDAVNAAPAEISSLEAELSSLRQ
CCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QMGALEADVVFIDETQLPAKQKQIKALNEVLAEKELAVRRKKVLLETLEARAPDLDEKIE
HHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
IAIGFVRVEAGIASQSLRSDIAEELRGKVHELQQIYAKVRALNGLVRNDRTADFLLSALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
PDLDHCMRVITQTGTYEQSTNLLEIRTDDTAAAEAEISEVMRPITEVLALARNHRPYVPL
CCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AKRPAPYVRKGAWDGPGGRVDRPEEPEEPPVRMKTIDEALAEPYEIKGDSSGFRTWKQAQ
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
EMNMTAAITDAQQSAEQ
HCCCHHEEHHHHHHCCC
>Mature Secondary Structure 
ARTQQLTAAVQAKPNLTIDAETISNLRELLDQRKKLDDAVNAAPAEISSLEAELSSLRQ
CCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QMGALEADVVFIDETQLPAKQKQIKALNEVLAEKELAVRRKKVLLETLEARAPDLDEKIE
HHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
IAIGFVRVEAGIASQSLRSDIAEELRGKVHELQQIYAKVRALNGLVRNDRTADFLLSALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
PDLDHCMRVITQTGTYEQSTNLLEIRTDDTAAAEAEISEVMRPITEVLALARNHRPYVPL
CCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AKRPAPYVRKGAWDGPGGRVDRPEEPEEPPVRMKTIDEALAEPYEIKGDSSGFRTWKQAQ
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
EMNMTAAITDAQQSAEQ
HCCCHHEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA