| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352460
Identifier: 115352460
GI number: 115352460
Start: 2656758
End: 2657462
Strand: Direct
Name: 115352460
Synonym: Bamb_2409
Alternate gene names: NA
Gene position: 2656758-2657462 (Clockwise)
Preceding gene: 115352459
Following gene: 115352461
Centisome position: 74.7
GC content: 58.16
Gene sequence:
>705_bases ATGATCTTTGAGGAGCACATGAACTTCTACAAGCTCAAGGAGGCCGCCACGGCAATCGCTGCGGTGCTCTACCCTGCAAA CTCTGGCGAAGAGAGCGAAGGTCCACGGCAAGATGCGGAGCGCAGCTATCTCGCTGCGCTTCAGCACGCTGTCTGCGAAG ACGAAATCGTCTATCGGGATCCGGGTAGCAAGCTGCCTATTCATCAAGACGGCATTGCGGCTTTCATGACCTCTCACTGG TGCGTCGTCAGCGTTGCAGATCTCAACGCATGGCTGCAGGCGAAAGGCATCGGCGTTCAGGTGCCATCCGTCTCGAGCGA TTCCGACCACATGGATGAATCTGCCGACACGACCCAAGAGGCGGGCGTGGTAGAGCCCGACTGGCCGACGAGCGCTCAAT TAGCGGATGCCCTCGGGCCCTATCTGGTTGATGGTCGCGACGGCGAATGGCTGAAGCGACGGTTAAATGATGCGGATCGA TATGCCGATCTTCTGAAGTACAGGCGGAAAGAAGGAAGAAGGCCTGTCGCCAGATGGAACGCCGGCGGTGTGACCGTCTA CCTGATCGCGTTGAAAGAGTTGACCTGGAAGGGCGCGAAAGCTGCGCTAGAGAAGCACTATCCAGATTCGCTGGGCGTGC TCGACGGTCTTGGGCAGCGTGAGGAGAAGGCGCCAGCCCAATGGTTTCCCACTACGCACGATTAA
Upstream 100 bases:
>100_bases ATGGTTGCTCACGGGCTTTTGACGGCGTACCACGTGCAGCGCAAGCGGAAGGCAGTTCATCCACCAACGTCGGACGGGCA CGCGGCGGCCGGCACGGACG
Downstream 100 bases:
>100_bases CCGCCGCATTCGCTCATCCCCGCATTACATCCTGCGGTGACCATACGGTCACCGTACGGTCGCACTGGCTGACTACCGTA GCTAAAGTGCTCTCGACATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MIFEEHMNFYKLKEAATAIAAVLYPANSGEESEGPRQDAERSYLAALQHAVCEDEIVYRDPGSKLPIHQDGIAAFMTSHW CVVSVADLNAWLQAKGIGVQVPSVSSDSDHMDESADTTQEAGVVEPDWPTSAQLADALGPYLVDGRDGEWLKRRLNDADR YADLLKYRRKEGRRPVARWNAGGVTVYLIALKELTWKGAKAALEKHYPDSLGVLDGLGQREEKAPAQWFPTTHD
Sequences:
>Translated_234_residues MIFEEHMNFYKLKEAATAIAAVLYPANSGEESEGPRQDAERSYLAALQHAVCEDEIVYRDPGSKLPIHQDGIAAFMTSHW CVVSVADLNAWLQAKGIGVQVPSVSSDSDHMDESADTTQEAGVVEPDWPTSAQLADALGPYLVDGRDGEWLKRRLNDADR YADLLKYRRKEGRRPVARWNAGGVTVYLIALKELTWKGAKAALEKHYPDSLGVLDGLGQREEKAPAQWFPTTHD >Mature_234_residues MIFEEHMNFYKLKEAATAIAAVLYPANSGEESEGPRQDAERSYLAALQHAVCEDEIVYRDPGSKLPIHQDGIAAFMTSHW CVVSVADLNAWLQAKGIGVQVPSVSSDSDHMDESADTTQEAGVVEPDWPTSAQLADALGPYLVDGRDGEWLKRRLNDADR YADLLKYRRKEGRRPVARWNAGGVTVYLIALKELTWKGAKAALEKHYPDSLGVLDGLGQREEKAPAQWFPTTHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25937; Mature: 25937
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFEEHMNFYKLKEAATAIAAVLYPANSGEESEGPRQDAERSYLAALQHAVCEDEIVYRD CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC PGSKLPIHQDGIAAFMTSHWCVVSVADLNAWLQAKGIGVQVPSVSSDSDHMDESADTTQE CCCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHCCCEEECCCCCCCCHHCCCCCCCHHH AGVVEPDWPTSAQLADALGPYLVDGRDGEWLKRRLNDADRYADLLKYRRKEGRRPVARWN CCCCCCCCCCHHHHHHHCCCEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEC AGGVTVYLIALKELTWKGAKAALEKHYPDSLGVLDGLGQREEKAPAQWFPTTHD CCCEEEEEEEHHHHHCCHHHHHHHHCCCCHHHHHHCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure MIFEEHMNFYKLKEAATAIAAVLYPANSGEESEGPRQDAERSYLAALQHAVCEDEIVYRD CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC PGSKLPIHQDGIAAFMTSHWCVVSVADLNAWLQAKGIGVQVPSVSSDSDHMDESADTTQE CCCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHCCCEEECCCCCCCCHHCCCCCCCHHH AGVVEPDWPTSAQLADALGPYLVDGRDGEWLKRRLNDADRYADLLKYRRKEGRRPVARWN CCCCCCCCCCHHHHHHHCCCEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEC AGGVTVYLIALKELTWKGAKAALEKHYPDSLGVLDGLGQREEKAPAQWFPTTHD CCCEEEEEEEHHHHHCCHHHHHHHHCCCCHHHHHHCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA