Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352454

Identifier: 115352454

GI number: 115352454

Start: 2651415

End: 2651735

Strand: Direct

Name: 115352454

Synonym: Bamb_2403

Alternate gene names: NA

Gene position: 2651415-2651735 (Clockwise)

Preceding gene: 115352453

Following gene: 115352455

Centisome position: 74.55

GC content: 65.11

Gene sequence:

>321_bases
ATGGTGACGACCCCAGAAATGCAAAAGGGCCGCGACTCCGGCAAGAGCGCGACCCAGACGACCCGAGGCAATGATACCGC
GCCCTCGGCAGCTGGCACATCCTTTCTCGATATACGCAGATCCGACTCGGAACGTCTGCGCGTGACCGTGAGCGAATACC
GCGGCCGCGTACTCGTCGACCTTCGGATCTGGTTCGCCGCTGAACACGGCGAATGGAAGCCGGGCCGTGCCGGCGTCTCG
CTGCGTCCTGACCAGGTCGGCGAAGTCATGCAGGCACTTCGCTTGGCTGCGCAAGCGGCGGACCCGGCGGGGATACGCTG
A

Upstream 100 bases:

>100_bases
GAAACGGCAACACCTCACGAAACGTTGTGCGGTCTGGTCGAATCGAGAGATTCACCGTTGGTTCGCGGATCCGCTGAACT
ATCGCTCGGAGGGCTGAGCG

Downstream 100 bases:

>100_bases
TGGCAAATCAAAAGAAATCGATCTTGACGGATAGGGCTTTTGGGCCTATCTTGTGCATCAGCGGCTGCGCTCTCGCGCGG
CCCACCACAGCCGAGAGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MVTTPEMQKGRDSGKSATQTTRGNDTAPSAAGTSFLDIRRSDSERLRVTVSEYRGRVLVDLRIWFAAEHGEWKPGRAGVS
LRPDQVGEVMQALRLAAQAADPAGIR

Sequences:

>Translated_106_residues
MVTTPEMQKGRDSGKSATQTTRGNDTAPSAAGTSFLDIRRSDSERLRVTVSEYRGRVLVDLRIWFAAEHGEWKPGRAGVS
LRPDQVGEVMQALRLAAQAADPAGIR
>Mature_106_residues
MVTTPEMQKGRDSGKSATQTTRGNDTAPSAAGTSFLDIRRSDSERLRVTVSEYRGRVLVDLRIWFAAEHGEWKPGRAGVS
LRPDQVGEVMQALRLAAQAADPAGIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11539; Mature: 11539

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTTPEMQKGRDSGKSATQTTRGNDTAPSAAGTSFLDIRRSDSERLRVTVSEYRGRVLVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEHHHCCCEEEEE
LRIWFAAEHGEWKPGRAGVSLRPDQVGEVMQALRLAAQAADPAGIR
EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVTTPEMQKGRDSGKSATQTTRGNDTAPSAAGTSFLDIRRSDSERLRVTVSEYRGRVLVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEHHHCCCEEEEE
LRIWFAAEHGEWKPGRAGVSLRPDQVGEVMQALRLAAQAADPAGIR
EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA