| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352453
Identifier: 115352453
GI number: 115352453
Start: 2651151
End: 2651411
Strand: Direct
Name: 115352453
Synonym: Bamb_2402
Alternate gene names: NA
Gene position: 2651151-2651411 (Clockwise)
Preceding gene: 115352452
Following gene: 115352454
Centisome position: 74.54
GC content: 56.32
Gene sequence:
>261_bases ATGCACTCCTCTAACAACGCACAAGGAGTGCAATGTATGTCGACGCAACAAAATCGAGCAGACACCCTACCGATTGATGG GTTCTCGCGCTGGAACGACTTGCACAGGTTCGTTCCCTTGAGCCGGGAGAGTGTGCGCCAGCGCGAACTGGCGGGCAGAT TTCCGAAACGGCAACACCTCACGAAACGTTGTGCGGTCTGGTCGAATCGAGAGATTCACCGTTGGTTCGCGGATCCGCTG AACTATCGCTCGGAGGGCTGA
Upstream 100 bases:
>100_bases GCGGTTGTGCCGCATGACCCTTTCGGTGTGGCGCCCAAAGCCAAGTAGCACCGTTATTTCTTGCTCCCCCCTAGCCGAAA GGGGGGCTTGCGACCGCCAA
Downstream 100 bases:
>100_bases GCGATGGTGACGACCCCAGAAATGCAAAAGGGCCGCGACTCCGGCAAGAGCGCGACCCAGACGACCCGAGGCAATGATAC CGCGCCCTCGGCAGCTGGCA
Product: prophage CP4-57 regulatory
Products: NA
Alternate protein names: Prophage CP4-57 Regulatory Protein; Phage Transcriptional Regulator; Conserved Domain Protein; Prophage CP4-57 Regulatory
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MHSSNNAQGVQCMSTQQNRADTLPIDGFSRWNDLHRFVPLSRESVRQRELAGRFPKRQHLTKRCAVWSNREIHRWFADPL NYRSEG
Sequences:
>Translated_86_residues MHSSNNAQGVQCMSTQQNRADTLPIDGFSRWNDLHRFVPLSRESVRQRELAGRFPKRQHLTKRCAVWSNREIHRWFADPL NYRSEG >Mature_86_residues MHSSNNAQGVQCMSTQQNRADTLPIDGFSRWNDLHRFVPLSRESVRQRELAGRFPKRQHLTKRCAVWSNREIHRWFADPL NYRSEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10181; Mature: 10181
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSSNNAQGVQCMSTQQNRADTLPIDGFSRWNDLHRFVPLSRESVRQRELAGRFPKRQHL CCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH TKRCAVWSNREIHRWFADPLNYRSEG HHHHHHCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure MHSSNNAQGVQCMSTQQNRADTLPIDGFSRWNDLHRFVPLSRESVRQRELAGRFPKRQHL CCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH TKRCAVWSNREIHRWFADPLNYRSEG HHHHHHCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA