Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352455

Identifier: 115352455

GI number: 115352455

Start: 2651886

End: 2652149

Strand: Direct

Name: 115352455

Synonym: Bamb_2404

Alternate gene names: NA

Gene position: 2651886-2652149 (Clockwise)

Preceding gene: 115352454

Following gene: 115352456

Centisome position: 74.56

GC content: 60.61

Gene sequence:

>264_bases
ATGCGATATACCCCACCGACTCCCAGCGATCTGGAGCAGTTGAAGCAAACCCTGCAGCTCAGCAGTGCGCAGATGGCGGA
TCTGTTCGGCGTGCAGGGTGGGCGGCAATGGCGGAAGTACACGGGCGGAGAGACTCCGCGCGAAATCAGTCCGCACATTC
TGTTCTTCGCGATGGCTCGGCTCGAGCTGGATGCGAAGACGCTCGACCGAATCTTGAATCGAATGCGCGACGTCGGCGCG
ACGATCGAGTTGGACGGCGAGTAA

Upstream 100 bases:

>100_bases
TTGTGCATCAGCGGCTGCGCTCTCGCGCGGCCCACCACAGCCGAGAGGATCCGACAAATGACGTACCCGTTCAGGGAGGC
CTTGGGCCGCCCTATCTCCC

Downstream 100 bases:

>100_bases
TCGCCGCTGGCGCATTCACTGCCTCCCTCCCGAATGCCCTCACCCGGTCGCCCGATCCGTTCGACCTTATCCCGAGCGCC
TGGCGCACCGGTCGGCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MRYTPPTPSDLEQLKQTLQLSSAQMADLFGVQGGRQWRKYTGGETPREISPHILFFAMARLELDAKTLDRILNRMRDVGA
TIELDGE

Sequences:

>Translated_87_residues
MRYTPPTPSDLEQLKQTLQLSSAQMADLFGVQGGRQWRKYTGGETPREISPHILFFAMARLELDAKTLDRILNRMRDVGA
TIELDGE
>Mature_87_residues
MRYTPPTPSDLEQLKQTLQLSSAQMADLFGVQGGRQWRKYTGGETPREISPHILFFAMARLELDAKTLDRILNRMRDVGA
TIELDGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9879; Mature: 9879

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYTPPTPSDLEQLKQTLQLSSAQMADLFGVQGGRQWRKYTGGETPREISPHILFFAMAR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHH
LELDAKTLDRILNRMRDVGATIELDGE
HHCCHHHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MRYTPPTPSDLEQLKQTLQLSSAQMADLFGVQGGRQWRKYTGGETPREISPHILFFAMAR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHH
LELDAKTLDRILNRMRDVGATIELDGE
HHCCHHHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA