Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

Click here to switch to the map view.

The map label for this gene is 115352392

Identifier: 115352392

GI number: 115352392

Start: 2577496

End: 2578665

Strand: Direct

Name: 115352392

Synonym: Bamb_2341

Alternate gene names: NA

Gene position: 2577496-2578665 (Clockwise)

Preceding gene: 115352391

Following gene: 115352393

Centisome position: 72.47

GC content: 74.87

Gene sequence:

>1170_bases
ATGAACGCGCCCACCACCCATCAAGCAGGACTCCGAATGATCATGATCGCGGCAGGCGTTGCGGCGCTGATGTCGCTGGC
CGCGTGCGGCGGCTCCGGCTCGCTGAGCAAGGGCACCGGCGGCTCCGGGTCGGGGTCCGGCGACACGACGGCGTCGACCG
GCGGCACCGGCAACGGTACGAGCGGCACGTCGGCATCGACCGGCGGTACCGGCAGCACCGGCAGCACCGGCAACGGCGCG
AGCGGCTCGTCGGCCAACGGCGTCGGCCAGACGCTCGCGGCGTCGAGCAACATCGTGACGGCCGGCGGCGGCGCCATCTC
GGGCGTCGGCACGGCGATCGGGGCCCAAACGCTGCCGGGCACGAACCCCGCGACCACGCAGGGGCTCGGCGCGGTCGTGC
AGGATGTCGGCGCGGCCGTCACGACGCTCGGCACCGGCCTCGGCTCGGGCCTCGGCCAGCTCGGCGCGTCGTCGAATCCG
GTCGGCACGACGGTCGCGAGCACGGGCGGCGTGGTCACGGATCTCGGCCAGGCCGTCGCCGCGACGGGCGGGGTCGTGTC
GAGCCTGGGGGCCAGCGGTTCCGCACTGGCGCCGCTTGCGCCCGTCACGTCGCCCGTCGGCGGTGCGGTGACGATGCTCG
GCAACACGATCGCGGGCGGCGGCGCGACGCTCGGCACGCAGCTGTCGACCGGCCCGGTCGCGCAAGTGACGGGCGCGGCC
AGCTCGGCGATCACGCCGATCACGACGACGGTCGGCTCGCTCACGCAGACGGCCGCCGCCAGCACGCCGCTCGGCGCGCC
GCTGACGAACCTCGTCACGACCGTCGGCAACGGTGTCGCGAACGCCGGCACGACGATCGCGAAGACGGGCAACAATCCGG
TCACGACCGGCGTCGGCAACGTCGTGACCGCGACCGGCAACACGGTCGCCACCGCAGGCACCGCGCTGCTGGGCGGCGGC
GCGGCCGCGACGAATCCGCTCGCCCCGGTGACGGGGCTCCTGTCGACCGGCGCACTCGGTGGCACGACGGGCGGCAGCAA
ACCGGCCGGCACGCTCACGTCGGCGGTCGGCGGCCTGACGGGCGGCAGCGGCACCGGCGTGCTGTCGAATACCGGCGGCG
GCCTGCTCGCCCCGGTCACGACGACGCTGGGCACGCTGGTCAAAAAGTAA

Upstream 100 bases:

>100_bases
AGACAACAACGACGCGCGCGCCGCTTCACTTCCGCAGCGACCGCACGCCGGCGCACACGAAGGCCGCCTGATCCATTTCC
ATAATCGAGACGAGGAAGAC

Downstream 100 bases:

>100_bases
CGTCACGCCGGCAGCCCCTGCGGCGCCCGTACCGTCGTCGACGGTCGGGCGCCGCGTGCGTTATGGCCCCTTATGCGTCC
GATGCCGCCCGCCCGGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MNAPTTHQAGLRMIMIAAGVAALMSLAACGGSGSLSKGTGGSGSGSGDTTASTGGTGNGTSGTSASTGGTGSTGSTGNGA
SGSSANGVGQTLAASSNIVTAGGGAISGVGTAIGAQTLPGTNPATTQGLGAVVQDVGAAVTTLGTGLGSGLGQLGASSNP
VGTTVASTGGVVTDLGQAVAATGGVVSSLGASGSALAPLAPVTSPVGGAVTMLGNTIAGGGATLGTQLSTGPVAQVTGAA
SSAITPITTTVGSLTQTAAASTPLGAPLTNLVTTVGNGVANAGTTIAKTGNNPVTTGVGNVVTATGNTVATAGTALLGGG
AAATNPLAPVTGLLSTGALGGTTGGSKPAGTLTSAVGGLTGGSGTGVLSNTGGGLLAPVTTTLGTLVKK

Sequences:

>Translated_389_residues
MNAPTTHQAGLRMIMIAAGVAALMSLAACGGSGSLSKGTGGSGSGSGDTTASTGGTGNGTSGTSASTGGTGSTGSTGNGA
SGSSANGVGQTLAASSNIVTAGGGAISGVGTAIGAQTLPGTNPATTQGLGAVVQDVGAAVTTLGTGLGSGLGQLGASSNP
VGTTVASTGGVVTDLGQAVAATGGVVSSLGASGSALAPLAPVTSPVGGAVTMLGNTIAGGGATLGTQLSTGPVAQVTGAA
SSAITPITTTVGSLTQTAAASTPLGAPLTNLVTTVGNGVANAGTTIAKTGNNPVTTGVGNVVTATGNTVATAGTALLGGG
AAATNPLAPVTGLLSTGALGGTTGGSKPAGTLTSAVGGLTGGSGTGVLSNTGGGLLAPVTTTLGTLVKK
>Mature_389_residues
MNAPTTHQAGLRMIMIAAGVAALMSLAACGGSGSLSKGTGGSGSGSGDTTASTGGTGNGTSGTSASTGGTGSTGSTGNGA
SGSSANGVGQTLAASSNIVTAGGGAISGVGTAIGAQTLPGTNPATTQGLGAVVQDVGAAVTTLGTGLGSGLGQLGASSNP
VGTTVASTGGVVTDLGQAVAATGGVVSSLGASGSALAPLAPVTSPVGGAVTMLGNTIAGGGATLGTQLSTGPVAQVTGAA
SSAITPITTTVGSLTQTAAASTPLGAPLTNLVTTVGNGVANAGTTIAKTGNNPVTTGVGNVVTATGNTVATAGTALLGGG
AAATNPLAPVTGLLSTGALGGTTGGSKPAGTLTSAVGGLTGGSGTGVLSNTGGGLLAPVTTTLGTLVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34539; Mature: 34539

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPTTHQAGLRMIMIAAGVAALMSLAACGGSGSLSKGTGGSGSGSGDTTASTGGTGNGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGTSASTGGTGSTGSTGNGASGSSANGVGQTLAASSNIVTAGGGAISGVGTAIGAQTLPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHCCCCCCC
TNPATTQGLGAVVQDVGAAVTTLGTGLGSGLGQLGASSNPVGTTVASTGGVVTDLGQAVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHH
ATGGVVSSLGASGSALAPLAPVTSPVGGAVTMLGNTIAGGGATLGTQLSTGPVAQVTGAA
HHCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCC
SSAITPITTTVGSLTQTAAASTPLGAPLTNLVTTVGNGVANAGTTIAKTGNNPVTTGVGN
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC
VVTATGNTVATAGTALLGGGAAATNPLAPVTGLLSTGALGGTTGGSKPAGTLTSAVGGLT
EEEECCCEEHHCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCC
GGSGTGVLSNTGGGLLAPVTTTLGTLVKK
CCCCCCEEECCCCCEEHHHHHHHHHHHCC
>Mature Secondary Structure
MNAPTTHQAGLRMIMIAAGVAALMSLAACGGSGSLSKGTGGSGSGSGDTTASTGGTGNGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGTSASTGGTGSTGSTGNGASGSSANGVGQTLAASSNIVTAGGGAISGVGTAIGAQTLPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHCCCCCCC
TNPATTQGLGAVVQDVGAAVTTLGTGLGSGLGQLGASSNPVGTTVASTGGVVTDLGQAVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHH
ATGGVVSSLGASGSALAPLAPVTSPVGGAVTMLGNTIAGGGATLGTQLSTGPVAQVTGAA
HHCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCC
SSAITPITTTVGSLTQTAAASTPLGAPLTNLVTTVGNGVANAGTTIAKTGNNPVTTGVGN
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC
VVTATGNTVATAGTALLGGGAAATNPLAPVTGLLSTGALGGTTGGSKPAGTLTSAVGGLT
EEEECCCEEHHCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCC
GGSGTGVLSNTGGGLLAPVTTTLGTLVKK
CCCCCCEEECCCCCEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA