Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is yggL [C]

Identifier: 115352391

GI number: 115352391

Start: 2576648

End: 2577037

Strand: Direct

Name: yggL [C]

Synonym: Bamb_2340

Alternate gene names: 115352391

Gene position: 2576648-2577037 (Clockwise)

Preceding gene: 115352390

Following gene: 115352392

Centisome position: 72.45

GC content: 65.64

Gene sequence:

>390_bases
ATGTCGCGCCAGCGCCCGCCGCCGCCCTTTTTCTTTTCACGTACATCCCACACCATGAGCCAACGCCACAACCGCCGCCA
GCGCAAGAAACTCCACATCGCCGAATTCCAGGAACTCGCGTTCAACGCGACCGCGCAATACCGCAACGAGCTGTCCGATC
TCGAGCGCGGCCAGCTGATCGATTCGTTCATCGATTTCGTCGAAGCGAACGGGCTGCTCACCGTCGCGTCCGCCGACGAA
GGGATCGGCGCCTACGTGATCTCCGGCGCGCCGCGCGGCACGACCACCGACGCCGACCGCGAGAGCGTGCGTGCATGGCT
GGCCGCACGGCCGGAGCTGACCGACGTCCAGGTCAGCGAATTCAGCGACGCGTGGTATCCGGACGCCTGA

Upstream 100 bases:

>100_bases
AGCCAGGAGCAGTACGATATCGTGCTGATGTAACCTCCTGCCTGCCCGCCGCCGGCTTTGCCGCGCGGCGCCCCGATGCG
GCCGCCCGGGCCGCTTGCGC

Downstream 100 bases:

>100_bases
CGCGCCGCTTGCTTCGTTCGTCGCGCGGCGCCCGCGCCTGCCCCCGTCAGGGCGGACCGGGCCGGCGCCGCCGCTTCACC
CGCACGTCTCCCCTTCCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSRQRPPPPFFFSRTSHTMSQRHNRRQRKKLHIAEFQELAFNATAQYRNELSDLERGQLIDSFIDFVEANGLLTVASADE
GIGAYVISGAPRGTTTDADRESVRAWLAARPELTDVQVSEFSDAWYPDA

Sequences:

>Translated_129_residues
MSRQRPPPPFFFSRTSHTMSQRHNRRQRKKLHIAEFQELAFNATAQYRNELSDLERGQLIDSFIDFVEANGLLTVASADE
GIGAYVISGAPRGTTTDADRESVRAWLAARPELTDVQVSEFSDAWYPDA
>Mature_128_residues
SRQRPPPPFFFSRTSHTMSQRHNRRQRKKLHIAEFQELAFNATAQYRNELSDLERGQLIDSFIDFVEANGLLTVASADEG
IGAYVISGAPRGTTTDADRESVRAWLAARPELTDVQVSEFSDAWYPDA

Specific function: Unknown

COG id: COG3171

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14603; Mature: 14472

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQRPPPPFFFSRTSHTMSQRHNRRQRKKLHIAEFQELAFNATAQYRNELSDLERGQLI
CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSFIDFVEANGLLTVASADEGIGAYVISGAPRGTTTDADRESVRAWLAARPELTDVQVSE
HHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHH
FSDAWYPDA
CCCCCCCCC
>Mature Secondary Structure 
SRQRPPPPFFFSRTSHTMSQRHNRRQRKKLHIAEFQELAFNATAQYRNELSDLERGQLI
CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSFIDFVEANGLLTVASADEGIGAYVISGAPRGTTTDADRESVRAWLAARPELTDVQVSE
HHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHH
FSDAWYPDA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA