| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is yggL [C]
Identifier: 115352391
GI number: 115352391
Start: 2576648
End: 2577037
Strand: Direct
Name: yggL [C]
Synonym: Bamb_2340
Alternate gene names: 115352391
Gene position: 2576648-2577037 (Clockwise)
Preceding gene: 115352390
Following gene: 115352392
Centisome position: 72.45
GC content: 65.64
Gene sequence:
>390_bases ATGTCGCGCCAGCGCCCGCCGCCGCCCTTTTTCTTTTCACGTACATCCCACACCATGAGCCAACGCCACAACCGCCGCCA GCGCAAGAAACTCCACATCGCCGAATTCCAGGAACTCGCGTTCAACGCGACCGCGCAATACCGCAACGAGCTGTCCGATC TCGAGCGCGGCCAGCTGATCGATTCGTTCATCGATTTCGTCGAAGCGAACGGGCTGCTCACCGTCGCGTCCGCCGACGAA GGGATCGGCGCCTACGTGATCTCCGGCGCGCCGCGCGGCACGACCACCGACGCCGACCGCGAGAGCGTGCGTGCATGGCT GGCCGCACGGCCGGAGCTGACCGACGTCCAGGTCAGCGAATTCAGCGACGCGTGGTATCCGGACGCCTGA
Upstream 100 bases:
>100_bases AGCCAGGAGCAGTACGATATCGTGCTGATGTAACCTCCTGCCTGCCCGCCGCCGGCTTTGCCGCGCGGCGCCCCGATGCG GCCGCCCGGGCCGCTTGCGC
Downstream 100 bases:
>100_bases CGCGCCGCTTGCTTCGTTCGTCGCGCGGCGCCCGCGCCTGCCCCCGTCAGGGCGGACCGGGCCGGCGCCGCCGCTTCACC CGCACGTCTCCCCTTCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSRQRPPPPFFFSRTSHTMSQRHNRRQRKKLHIAEFQELAFNATAQYRNELSDLERGQLIDSFIDFVEANGLLTVASADE GIGAYVISGAPRGTTTDADRESVRAWLAARPELTDVQVSEFSDAWYPDA
Sequences:
>Translated_129_residues MSRQRPPPPFFFSRTSHTMSQRHNRRQRKKLHIAEFQELAFNATAQYRNELSDLERGQLIDSFIDFVEANGLLTVASADE GIGAYVISGAPRGTTTDADRESVRAWLAARPELTDVQVSEFSDAWYPDA >Mature_128_residues SRQRPPPPFFFSRTSHTMSQRHNRRQRKKLHIAEFQELAFNATAQYRNELSDLERGQLIDSFIDFVEANGLLTVASADEG IGAYVISGAPRGTTTDADRESVRAWLAARPELTDVQVSEFSDAWYPDA
Specific function: Unknown
COG id: COG3171
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14603; Mature: 14472
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQRPPPPFFFSRTSHTMSQRHNRRQRKKLHIAEFQELAFNATAQYRNELSDLERGQLI CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSFIDFVEANGLLTVASADEGIGAYVISGAPRGTTTDADRESVRAWLAARPELTDVQVSE HHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHH FSDAWYPDA CCCCCCCCC >Mature Secondary Structure SRQRPPPPFFFSRTSHTMSQRHNRRQRKKLHIAEFQELAFNATAQYRNELSDLERGQLI CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSFIDFVEANGLLTVASADEGIGAYVISGAPRGTTTDADRESVRAWLAARPELTDVQVSE HHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHH FSDAWYPDA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA