The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is yghZ [H]

Identifier: 115352302

GI number: 115352302

Start: 2484463

End: 2485434

Strand: Direct

Name: yghZ [H]

Synonym: Bamb_2251

Alternate gene names: 115352302

Gene position: 2484463-2485434 (Clockwise)

Preceding gene: 115352300

Following gene: 115352303

Centisome position: 69.86

GC content: 65.43

Gene sequence:

>972_bases
ATGCACTATCGACGGCTAGGCCGCTCCGGCCTCCAGATCAGCGAGCTTTCGCTCGGCTCGTGGGTCACCTACGGCAACCA
GGTCGATCACCGGGCCGCCCGCGAATGCCTCGCGGCGGCCCGCGATGCGGGCGTCAATTTCTTCGACAACGCCGAGGTCT
ACGCGGGCGGCAAATCCGAGGAAATCATGGGCCAGGCGCTCAAGTCGCTCGGCTGGCCGCGCATCAGCTATCTCGTGTCG
ACGAAGTTCTTCTGGGGGCTCGCGGAAGCGCCGAATCAGTACCACACGCTGAACCGGAAATATCTGCTGAACGCGATCGA
CGGCTCGCTGCGCCGGCTGCAGCTCGACTATGTCGACCTCGTCTACTGCCATCGCCCGGATCCGAACACGCCGATCGAGG
AAACGGTGTGGGCGATGAGCGACATGATCGTGCGCGGCAAGGCGCTGTACTGGGGCACGTCCGAATGGAGTGCCGACGAG
ATCCGCGCGGCGTATGAAATTGCCGAGCGGCACCATCTGCACAAACCGGTCGTCGAGCAGCCGCAGTACAACCTGTTCCA
CCGTACCCGGGTCGAACGCGAATACGCGCGGCTCTACGACGACTACGGCCTCGGCCTGACGACCTGGAGCCCGCTTGCAT
CGGGGCTGCTCACCGGCAAGTACCGTAATGGCGTACCGCCGGGCAGCCGCGCGGAACTGCAGGGCTACGATTGGCTCCGC
GATCGGCTGACGGACCCGACCAGCAACGATGTGGTCGAACGGCTCGGCGGAATCGCGGCCGAACTCGGTTGCAGCACCGC
CCAGCTCGCGATCGCGTGGGTACTCGCGAATCCGCGCGTGAGTTCGGTCATTACGGGCGCCTCCCGGATCGAGCAGATCG
GCGACAACATGCGCGCGCTCGACGTCGCCGCCAAGCTGACGCCGGAGGTCAGGCAACGCATCGAGGAGGCCGTCGGCGAC
GCATACGAGTAA

Upstream 100 bases:

>100_bases
CTCGTGCCGGCGGGCCAGCCGCTATTGTGCACGATCGGCCCCGCCGTTCGCGCGCAAAACGTCTAAGCTTAAGGTCGGTT
CCGAGTCGCGGGAGATTTTC

Downstream 100 bases:

>100_bases
GGCGAGTCACGTCCACTCGCGTACAATACGCGGCCGCAGTGGACGCGGCCCGACGGCCGCGCGCGATCGTCCGTTTTCAT
CGATTCATCCTTCGTTTCAG

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MHYRRLGRSGLQISELSLGSWVTYGNQVDHRAARECLAAARDAGVNFFDNAEVYAGGKSEEIMGQALKSLGWPRISYLVS
TKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDLVYCHRPDPNTPIEETVWAMSDMIVRGKALYWGTSEWSADE
IRAAYEIAERHHLHKPVVEQPQYNLFHRTRVEREYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPPGSRAELQGYDWLR
DRLTDPTSNDVVERLGGIAAELGCSTAQLAIAWVLANPRVSSVITGASRIEQIGDNMRALDVAAKLTPEVRQRIEEAVGD
AYE

Sequences:

>Translated_323_residues
MHYRRLGRSGLQISELSLGSWVTYGNQVDHRAARECLAAARDAGVNFFDNAEVYAGGKSEEIMGQALKSLGWPRISYLVS
TKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDLVYCHRPDPNTPIEETVWAMSDMIVRGKALYWGTSEWSADE
IRAAYEIAERHHLHKPVVEQPQYNLFHRTRVEREYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPPGSRAELQGYDWLR
DRLTDPTSNDVVERLGGIAAELGCSTAQLAIAWVLANPRVSSVITGASRIEQIGDNMRALDVAAKLTPEVRQRIEEAVGD
AYE
>Mature_323_residues
MHYRRLGRSGLQISELSLGSWVTYGNQVDHRAARECLAAARDAGVNFFDNAEVYAGGKSEEIMGQALKSLGWPRISYLVS
TKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDLVYCHRPDPNTPIEETVWAMSDMIVRGKALYWGTSEWSADE
IRAAYEIAERHHLHKPVVEQPQYNLFHRTRVEREYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPPGSRAELQGYDWLR
DRLTDPTSNDVVERLGGIAAELGCSTAQLAIAWVLANPRVSSVITGASRIEQIGDNMRALDVAAKLTPEVRQRIEEAVGD
AYE

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI27436969, Length=323, Percent_Identity=45.8204334365325, Blast_Score=308, Evalue=5e-84,
Organism=Homo sapiens, GI4504825, Length=321, Percent_Identity=45.7943925233645, Blast_Score=306, Evalue=1e-83,
Organism=Homo sapiens, GI27436964, Length=318, Percent_Identity=46.8553459119497, Blast_Score=303, Evalue=1e-82,
Organism=Homo sapiens, GI27436962, Length=318, Percent_Identity=46.8553459119497, Blast_Score=302, Evalue=3e-82,
Organism=Homo sapiens, GI27436966, Length=318, Percent_Identity=46.5408805031447, Blast_Score=300, Evalue=1e-81,
Organism=Homo sapiens, GI27436971, Length=323, Percent_Identity=46.749226006192, Blast_Score=296, Evalue=3e-80,
Organism=Homo sapiens, GI41152114, Length=316, Percent_Identity=30.0632911392405, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI223718702, Length=316, Percent_Identity=27.5316455696203, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI41327764, Length=291, Percent_Identity=28.5223367697594, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI87081735, Length=315, Percent_Identity=36.8253968253968, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1789375, Length=326, Percent_Identity=35.8895705521472, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1788070, Length=320, Percent_Identity=29.6875, Blast_Score=121, Evalue=6e-29,
Organism=Escherichia coli, GI1789199, Length=353, Percent_Identity=30.028328611898, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1788081, Length=303, Percent_Identity=25.7425742574257, Blast_Score=73, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6325169, Length=347, Percent_Identity=27.0893371757925, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6323998, Length=328, Percent_Identity=27.4390243902439, Blast_Score=94, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6319958, Length=304, Percent_Identity=27.6315789473684, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6319951, Length=341, Percent_Identity=26.099706744868, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322615, Length=226, Percent_Identity=26.9911504424779, Blast_Score=73, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24640980, Length=337, Percent_Identity=32.9376854599407, Blast_Score=193, Evalue=1e-49,
Organism=Drosophila melanogaster, GI45549126, Length=337, Percent_Identity=32.9376854599407, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24646155, Length=311, Percent_Identity=26.3665594855305, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24646159, Length=237, Percent_Identity=28.6919831223629, Blast_Score=88, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR005399
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36348; Mature: 36348

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYRRLGRSGLQISELSLGSWVTYGNQVDHRAARECLAAARDAGVNFFDNAEVYAGGKSE
CCHHHHCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHH
EIMGQALKSLGWPRISYLVSTKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCHHHHEEECEEEE
VYCHRPDPNTPIEETVWAMSDMIVRGKALYWGTSEWSADEIRAAYEIAERHHLHKPVVEQ
EEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHCC
PQYNLFHRTRVEREYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPPGSRAELQGYDWLR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
DRLTDPTSNDVVERLGGIAAELGCSTAQLAIAWVLANPRVSSVITGASRIEQIGDNMRAL
HHCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCHHHH
DVAAKLTPEVRQRIEEAVGDAYE
HHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHYRRLGRSGLQISELSLGSWVTYGNQVDHRAARECLAAARDAGVNFFDNAEVYAGGKSE
CCHHHHCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHH
EIMGQALKSLGWPRISYLVSTKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCHHHHEEECEEEE
VYCHRPDPNTPIEETVWAMSDMIVRGKALYWGTSEWSADEIRAAYEIAERHHLHKPVVEQ
EEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHCC
PQYNLFHRTRVEREYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPPGSRAELQGYDWLR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
DRLTDPTSNDVVERLGGIAAELGCSTAQLAIAWVLANPRVSSVITGASRIEQIGDNMRAL
HHCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCHHHH
DVAAKLTPEVRQRIEEAVGDAYE
HHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]